Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0733 |
Symbol | |
ID | 8324896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 810058 |
End bp | 812946 |
Gene Length | 2889 bp |
Protein Length | 962 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644941277 |
Product | DNA repair exonuclease, SbcC |
Protein accession | YP_003098542 |
Protein GI | 256374882 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGCTGC ACCGGTTGGA GCTGTCGGCG TTCGGGCCGT ATCCGGGGCG CGAGGTGGTG GACTTCGACG CGCTCGGCGC GGACGGGCTG TTCCTGCTGC ACGGGGACAC CGGCGCGGGC AAGACGACGC TGCTGGACGC GGTCGCGTTC GCCCTGTTCG GGCAGGTGCC GGGGGCGCGC GGCGAGGTCA AGCGGCTGCG CTGCGACTAC GCGTCCCCGG ACGTGGAGAC GGTGGTGTCG CTGGAGCTGA CCGTGCGGGA GCGGCGGCTG GTGATCACCC GCAGCCCGGA GTACGAGCGG CCCAAGAAGC GCGGCGGCGG CACGACCAGG CAGAACGCGA AGGCGGCGCT GGCGTGGGTG AGCGGCTGGG AGGGCGAGGG GCACGGCCGG ATCGACGAGG TGGCGCGCGA GGTCGAGTCG CTGCTGGGGA TGACGGCGCA CCAGTTCTTC CAGGTGGTGC TGCTGCCGCA GGGCGAGTTC GCGCGGTTCC TGCGGGCGGA CACGGGCGAG CGGGAGAAGC TGCTGGAGAA GCTGTTCGGC ACCGAGCGGT TCCTGGCGGT GGAGAAGTGG TTCCGGGAGC GCCGGGCCGA GCGGGGGCGG GAGCTGCGGG AGCTGACCGA GGCGAACGTC CGGCTGGCGG GCAACGTCGC CGAGGCCGCC CGCGCTGAGC AGCCGGAGGA CGGCGGCGAC CCGGCGTGGC TGGAGGCGCT GCTCGGCGGG CTGGCCGAGG AGGCGGGGCG CGCGCAGGAG CTGGCCGGGA CGACCGCCGA GGCCAGAACC GGGGCCGAGC GGGCCTGGCA GGGCGCCCGC GACCTGGAGG CGCTGGTGGG GCGGGTGCGC CGGGCGCACG ACGAGCTGGT GCGGTGCGCG GAGGACGAGC CGGAGCGCAA GCGGCTGCTG GACGAGGCAG AGGCCGCCAG GCGTGCCGCG CCGGTCGTCC AGGCCCTGCG GGGCGGGGAT CGGGCGCGGG TGGCGCTGGA GGGCGCTGAG GCGGCGGAAC TGGCCTCGGC GAAGGCGGTG GGGGCGCTGA TGGGCGGAGT GGTCGCCGAT GACCCGCGCG CCGAGGGCGA GCGCTGCCGC GACGAGGCCG GTGGGCTCAC CCGGTTGGCG GAGGAGGCGC GGGAGCAGCG GGAGGCGCTG CGCGCGCTCG ACGCGGTCGT GTCCAGGCGG GAGGTCGCCG CCGCCCGGCT GGCCGAGCTG ACCGCCGCGC TGGAGGGCGC GCCTGAGCGG CTGCGGTCCG CGCGGGAGGC CGTGGAGGCG GCGAAGCTGG CCCGCGCGGC ACTGCCGGAG GCCTCAGCCC GAGCCAAGGC CGCTACCGCG CTACCGGCGG CGGTCCGCGC GTCTGACGAG GCCGAGGCGG CGCGTTCGGT CGCCGTGGAC GTTCACCAGG CGGCGGTGGA CGCGCGCCAG GCCGTCCGGC AGCGCCGCCT GGACGGCATG GCCGCCGAAC TGGCCGGTGA GCTGGTGGAC GGGCTGCCGT GCCAGGTCTG CGGCGCGGGA GAGCATCCCG CGCCCGCCGC GTTCGACGGC GAGGCCGTGA CGGCGGTCGA CGAGGACCGG GCGGGCGCCG CCGAGGCGGT GGCGCTGGAG CGCAGGCGAG CGGCGGAGGA CGCCGCCTAC CGGGCGCTGG GGGCCGTGGA CGCCCTGCGG TCCGCCGTCG GCGACCGCGA TCCGGCTGAG CTGGTGGCCG AGCACCGCGA GCTGGCCGGG CTGGCCGCGC TGACGGCCGA GCGCGAGTCT GCGCTGCGCG GGCTGGAGAC CGGGACGGCC GCGCTGACCG AGGAGCGCGC GGAGCTGGAG CGCGACGTGG TCGGCCTGGA GGCGCGCGGG TCCGAGCTGG CGGCGACCAC CGCCGAGCGA GCCGCACGCC TGGAGCAGGC CCGAGAGGGC TTCCCGGACG TGGCCGCGAG ACGCGCCCAC CTGCTCTCGG CGGCCGACGC GCTGGACGAG TTGGCCCGCC GCCGCGCCGA GGTCTTGGGT GCTGCCGAGC GCGCGGCGCA GCTGGCGGGC GAGGTGGCGG AGCAGGTCGC GGAGGCCGGT TTCGCGACCG CCGCCGACGC CCGTGAGGCT GTCCGCACCG CGGAGCAGGT AGCCGGGTTG GAGCGCCGGG TGCGCGAGGC CGACGCCGCG AGGGCCGCCG CCGAGGCGGT CGTGGCCGAC CACCCGGACG TGGACCCTTC GGTGGAGGTC GACGCGGGGG GCGCCGAGCG CCGGTTCCGC GAGGCCGGCC GGGAGGCGGA GGCGGCGGCG GGTGCGTCGA GCGCGGCGGT TGGCCGGTTG GCGCGCGCGG AGGAGCTGGC TGAGCGGCTG AGGGCGGCGT GGGCGCGGTT GGCGCCGGTC GAGGCGGAGT ACCGGGAGCT GGACGCGTTC ACCGACGTGA TCAACGGCCG GGGCCAGAAC ACCGAGAGCA TGACCCTGCG CACGTACGTG CTGGCCGCGA AGCTGGAGGA GGTCGCGGTC GCGGCGAGCG AGCGGCTGGA CCGGATGAGC CAGGGCCGCT ACCGCTTCGT GCACTCCACC GAGGCGGGCC CGCGCGGGGC CAGGGGCGGG CTGGGGCTCG ACGTGCTCGA CGACTACTCC GGCCACCAAA GGCCCACGAA GACGCTCAGC GGCGGCGAGT CGTTCCTGGC CTCGCTGGCG CTCGCGCTGG GCCTGGCGGA CGTGGTGTCG CAGGGCGCGG TGCTGGACAC GCTGTTCGTC GACGAGGGGT TCGGCACGCT CGACGCCGAC ACCCTCGACC TGGTCATGAA CACCCTGGAC GACCTGCGCG CGGGCGGCCG GGTGGTGGGG CTGGTGTCGC ACGTGGAGGA GCTGCGGCAG CGCATCCCGA CCCGGTTGAG GGTCAGGAAG GCGCGCGCCG GGTCCACCCT GGAGGTGACC ACGGCGTAG
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Protein sequence | MRLHRLELSA FGPYPGREVV DFDALGADGL FLLHGDTGAG KTTLLDAVAF ALFGQVPGAR GEVKRLRCDY ASPDVETVVS LELTVRERRL VITRSPEYER PKKRGGGTTR QNAKAALAWV SGWEGEGHGR IDEVAREVES LLGMTAHQFF QVVLLPQGEF ARFLRADTGE REKLLEKLFG TERFLAVEKW FRERRAERGR ELRELTEANV RLAGNVAEAA RAEQPEDGGD PAWLEALLGG LAEEAGRAQE LAGTTAEART GAERAWQGAR DLEALVGRVR RAHDELVRCA EDEPERKRLL DEAEAARRAA PVVQALRGGD RARVALEGAE AAELASAKAV GALMGGVVAD DPRAEGERCR DEAGGLTRLA EEAREQREAL RALDAVVSRR EVAAARLAEL TAALEGAPER LRSAREAVEA AKLARAALPE ASARAKAATA LPAAVRASDE AEAARSVAVD VHQAAVDARQ AVRQRRLDGM AAELAGELVD GLPCQVCGAG EHPAPAAFDG EAVTAVDEDR AGAAEAVALE RRRAAEDAAY RALGAVDALR SAVGDRDPAE LVAEHRELAG LAALTAERES ALRGLETGTA ALTEERAELE RDVVGLEARG SELAATTAER AARLEQAREG FPDVAARRAH LLSAADALDE LARRRAEVLG AAERAAQLAG EVAEQVAEAG FATAADAREA VRTAEQVAGL ERRVREADAA RAAAEAVVAD HPDVDPSVEV DAGGAERRFR EAGREAEAAA GASSAAVGRL ARAEELAERL RAAWARLAPV EAEYRELDAF TDVINGRGQN TESMTLRTYV LAAKLEEVAV AASERLDRMS QGRYRFVHST EAGPRGARGG LGLDVLDDYS GHQRPTKTLS GGESFLASLA LALGLADVVS QGAVLDTLFV DEGFGTLDAD TLDLVMNTLD DLRAGGRVVG LVSHVEELRQ RIPTRLRVRK ARAGSTLEVT TA
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