Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0705 |
Symbol | |
ID | 8324868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 781935 |
End bp | 783116 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644941249 |
Product | 4-hydroxyphenylpyruvate dioxygenase |
Protein accession | YP_003098514 |
Protein GI | 256374854 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCATC AGCTTGACGA CGTGAGCTAC GACCAGCTCC GCCAACTGGT GGGCCTGGTC GACTACGACG GGACGCGGGA CCCGTTCCCC GTGCGGTCGA TGGACGCCGT GGTCTTCGTG GTCGGCAACG CCACCCAGGC CGCGCTGTTC TACCAGTCCG CGTTCGGCAT GGACCTGGTC GCCTACGCGG GCCCGGAGAC CGGTCGGCAC GACCACAAGT CGTACGTGCT GAAGTCCGGG TCGGCCCGGT TCGTGGTGCG CGGCGGGGTC CGGCCGGGCA GCCCGCTGCT GGAGCACCAC CGGGCGCACG GCGACGGCGT CGTCGACCTC GCGCTGGAGG TCGCCGACGT GGACAAGTGC GTGGCGCACG CCCGCGCGCA GGGCGCGACC GTGCTGGAGG AGCCGCACGA CGTGTCCGAC GAGCACGGCA CCGTGCGGAT GGCGGCCATC GCGACCTACG GCGAGACCCG CCACAGCCTG GTGGACCGCT CCCGCTACAC CGGGCCCTAC CTGCCCGGCT ACCAGGCGCG CGAGACCCAG GTGCGCAGGC CGGAGGGCGC GCCGAAGCGG CTGTTCCAGG CGGTCGACCA CTGCGTCGGC AACGTCGAGC TGGGCCGCAT GGACGAGTGG GTCTCCTGGT ACAACCGCGT CATGGGCTTC GTGAACATGG CGGAGTTCAT CGGCGACGAC ATCGCCACCG ACTACTCGGC GCTGATGAGC AAGGTGGTGT CGAACGGCAA CCACCGGGTC AAGTTCCCGC TCAACGAGCC CGCGCTCGGC AAGAGGAAGT CGCAGATCGA CGAGTACCTG GAGTTCTACG GCGGCGCGGG CGTGCAGCAC ATCGCGCTGG CCACCAACGA CATCATCGGC ACGATCACCG CGATGCGCGC GGCGGGCGTG GAGTTCCTGG ACGCCCCCGA CTCCTACTAC GAGGACCCGG AGCTGCGGGC GCGCATCGGG CGGGTGCGGC TGCCGATCGA GGTGCTCCAG GAGCACAAGG TGCTCGTGGA CCGCGACGAG GACGGCTACC TGCTGCAGAT CTTCACCAAG CCGGTGGGCG ACCGGCCGAC GGTGTTCTAC GAGCTGATCG AGCGGCACGG CTCGCTCGGC TTCGGCAAGG GCAACTTCAA GGCCCTGTTC GAGGCGATCG AGCGCGAGCA GGAGCGCAGG GGCAACCTCT GA
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Protein sequence | MTHQLDDVSY DQLRQLVGLV DYDGTRDPFP VRSMDAVVFV VGNATQAALF YQSAFGMDLV AYAGPETGRH DHKSYVLKSG SARFVVRGGV RPGSPLLEHH RAHGDGVVDL ALEVADVDKC VAHARAQGAT VLEEPHDVSD EHGTVRMAAI ATYGETRHSL VDRSRYTGPY LPGYQARETQ VRRPEGAPKR LFQAVDHCVG NVELGRMDEW VSWYNRVMGF VNMAEFIGDD IATDYSALMS KVVSNGNHRV KFPLNEPALG KRKSQIDEYL EFYGGAGVQH IALATNDIIG TITAMRAAGV EFLDAPDSYY EDPELRARIG RVRLPIEVLQ EHKVLVDRDE DGYLLQIFTK PVGDRPTVFY ELIERHGSLG FGKGNFKALF EAIEREQERR GNL
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