Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0650 |
Symbol | |
ID | 8324811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 715722 |
End bp | 717494 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644941192 |
Product | ABC transporter related |
Protein accession | YP_003098459 |
Protein GI | 256374799 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAACT TGGTCAACTT GGAGAACGTC TCCAAGTCGT TCGGTGTGCG TCCGCTGCTC GACGGGGTGT CCCTGGGCGT GGGCGAGGGG GACCGGATCG GCGTCGTCGG CCTCAACGGC GGCGGCAAGA CCACCCTGCT GGAGGTGCTG GCGGGCGTCG CGGAGCCCGA CGACGGGCGG GTCAGCCAGA ACCGGGGGCT GCGGATGGCC GTGGTCACCC AGCGCACCAC GCTCGCCGAG GGCTCCACCG TGCGCGACGC CGTGATCGCG CCGCTGAACT TCGCCGCCGA GCACGAGTGG GCCGCCGACC CGCGCGTGCG GTCCGTGCTC GACGGCCTCG GCATCACCGC GCTCGGGCTG GACTCGCCGG TCGGCACCAT GTCCGGCGGC GAGCGGCGCC GGGTGGCGCT GGCGGCGGCG CTCGTGCAGG AGCTGGACCT GGTGGTGCTC GACGAGCCCA CCAACCACCT GGACGTCGAG GGCGTGCGCT GGCTGGCCGA GCACCTGCTG GCCCGGCGCA CCGCGCTCGT CGTGGTGACC CACGACCGGT GGTTCCTGGA CACGGTCTGC TCCCGCACCT GGGAGGTCGT CGGCGGGCGC GTCGAGCAGT ACGAGGGCGG GTACGCGGAC TGGGTGTACG CGCGCGCCGA GCGCGGCAGG CTCGCAGACG CCGCCGAGGA GAAGCGCCGC AACCTGGCCC GCAAGGAGCT CGCCTGGCTG CGCCGGGGAG CCCCGGCCCG CACGTCCAAG CCGCGCTACC GCATCGAGGC CGCCGAGGCC CTGATCTCGG ACGTGCCCGC GCCGCGCGAC ACCGTGGAGC TGATGGCGTT CGCCAAGCGG CGGCTGGGTC GCACGGTCGT GGAGCTGGAG GACGCCACCC TCACCGTCGG TGACCGCACG CTGGTGCGCG ACCTGACCTG GCGCGTGGGT CCCGGCGACC GGATCGGCAT CGTCGGCGTC AACGGGTCCG GGAAGACCAC GCTGCTGCGG GCGCTCGCGG GCGAGCGGGA GCTGGACGGC GGCGGGAAGC GGATCGAGGG GCAGACGGTC AAGCTCGCGC ACCTGAGCCA GGAGCTGCAC GACCTGGACG GGTCGATGCG GGTGCTGGAG GCCGTGGAGG AGGTGGCGCG GCGGATCGTG CTGGGGAAGA TGGAGCTGTC CGCGTCGCAG CTGGCCGAGC GGTTCGGGTT CTCCTCGCAG CGGCAGTGGA CCCCGGTCGG GGACCTGTCC GGCGGCGAGC GGCGGCGCCT GCAGCTCGCC CGGCTGCTGA TGGGCGAGCC GAACGTGCTG CTGCTCGACG AGCCGACCAA CGACCTGGAC ATCGACACCC TCCAGCAGCT GGAGGACCTG CTCGACTCGT GGCCGGGCAC GCTGGTGGTG ATCTCGCACG ACCGGTACCT GGTGGAGCGG GTGTGCGACA AGGTCGTGGC GCTGTTCGGC GACGGCGGGC TGACCGACCT GGTCGGCGGC ATCGAGGAGT ACCTCCAGCG GAGGGACCGG CAGAGCGCGG CGGCTGCCGC CCCGGTGGCC GCGGCGACCG TGAAGGCCCC GTCGTCGGCG GCGGACCAGC GGGCGGCGCG CAAGGAGCTG TCGCGGCTGG AGCGGAGGTT GGAGGCGCTG CAGAAGAAGG AGGCCGGCCT GCACGCGTCC CTGGCCGAGG CGGCGACCGA CCCGGAGCGG CTGATGGCGC TGGGGGCGGA GCTGAAGGCC GTGCTGGCGG AGGCGGCGGA GGTCGAGGAG CAGTGGATGG AGGCGGCGGA GGCCGCTGAG TAG
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Protein sequence | MANLVNLENV SKSFGVRPLL DGVSLGVGEG DRIGVVGLNG GGKTTLLEVL AGVAEPDDGR VSQNRGLRMA VVTQRTTLAE GSTVRDAVIA PLNFAAEHEW AADPRVRSVL DGLGITALGL DSPVGTMSGG ERRRVALAAA LVQELDLVVL DEPTNHLDVE GVRWLAEHLL ARRTALVVVT HDRWFLDTVC SRTWEVVGGR VEQYEGGYAD WVYARAERGR LADAAEEKRR NLARKELAWL RRGAPARTSK PRYRIEAAEA LISDVPAPRD TVELMAFAKR RLGRTVVELE DATLTVGDRT LVRDLTWRVG PGDRIGIVGV NGSGKTTLLR ALAGERELDG GGKRIEGQTV KLAHLSQELH DLDGSMRVLE AVEEVARRIV LGKMELSASQ LAERFGFSSQ RQWTPVGDLS GGERRRLQLA RLLMGEPNVL LLDEPTNDLD IDTLQQLEDL LDSWPGTLVV ISHDRYLVER VCDKVVALFG DGGLTDLVGG IEEYLQRRDR QSAAAAAPVA AATVKAPSSA ADQRAARKEL SRLERRLEAL QKKEAGLHAS LAEAATDPER LMALGAELKA VLAEAAEVEE QWMEAAEAAE
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