Gene Amir_0650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0650 
Symbol 
ID8324811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp715722 
End bp717494 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content74% 
IMG OID644941192 
ProductABC transporter related 
Protein accessionYP_003098459 
Protein GI256374799 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAACT TGGTCAACTT GGAGAACGTC TCCAAGTCGT TCGGTGTGCG TCCGCTGCTC 
GACGGGGTGT CCCTGGGCGT GGGCGAGGGG GACCGGATCG GCGTCGTCGG CCTCAACGGC
GGCGGCAAGA CCACCCTGCT GGAGGTGCTG GCGGGCGTCG CGGAGCCCGA CGACGGGCGG
GTCAGCCAGA ACCGGGGGCT GCGGATGGCC GTGGTCACCC AGCGCACCAC GCTCGCCGAG
GGCTCCACCG TGCGCGACGC CGTGATCGCG CCGCTGAACT TCGCCGCCGA GCACGAGTGG
GCCGCCGACC CGCGCGTGCG GTCCGTGCTC GACGGCCTCG GCATCACCGC GCTCGGGCTG
GACTCGCCGG TCGGCACCAT GTCCGGCGGC GAGCGGCGCC GGGTGGCGCT GGCGGCGGCG
CTCGTGCAGG AGCTGGACCT GGTGGTGCTC GACGAGCCCA CCAACCACCT GGACGTCGAG
GGCGTGCGCT GGCTGGCCGA GCACCTGCTG GCCCGGCGCA CCGCGCTCGT CGTGGTGACC
CACGACCGGT GGTTCCTGGA CACGGTCTGC TCCCGCACCT GGGAGGTCGT CGGCGGGCGC
GTCGAGCAGT ACGAGGGCGG GTACGCGGAC TGGGTGTACG CGCGCGCCGA GCGCGGCAGG
CTCGCAGACG CCGCCGAGGA GAAGCGCCGC AACCTGGCCC GCAAGGAGCT CGCCTGGCTG
CGCCGGGGAG CCCCGGCCCG CACGTCCAAG CCGCGCTACC GCATCGAGGC CGCCGAGGCC
CTGATCTCGG ACGTGCCCGC GCCGCGCGAC ACCGTGGAGC TGATGGCGTT CGCCAAGCGG
CGGCTGGGTC GCACGGTCGT GGAGCTGGAG GACGCCACCC TCACCGTCGG TGACCGCACG
CTGGTGCGCG ACCTGACCTG GCGCGTGGGT CCCGGCGACC GGATCGGCAT CGTCGGCGTC
AACGGGTCCG GGAAGACCAC GCTGCTGCGG GCGCTCGCGG GCGAGCGGGA GCTGGACGGC
GGCGGGAAGC GGATCGAGGG GCAGACGGTC AAGCTCGCGC ACCTGAGCCA GGAGCTGCAC
GACCTGGACG GGTCGATGCG GGTGCTGGAG GCCGTGGAGG AGGTGGCGCG GCGGATCGTG
CTGGGGAAGA TGGAGCTGTC CGCGTCGCAG CTGGCCGAGC GGTTCGGGTT CTCCTCGCAG
CGGCAGTGGA CCCCGGTCGG GGACCTGTCC GGCGGCGAGC GGCGGCGCCT GCAGCTCGCC
CGGCTGCTGA TGGGCGAGCC GAACGTGCTG CTGCTCGACG AGCCGACCAA CGACCTGGAC
ATCGACACCC TCCAGCAGCT GGAGGACCTG CTCGACTCGT GGCCGGGCAC GCTGGTGGTG
ATCTCGCACG ACCGGTACCT GGTGGAGCGG GTGTGCGACA AGGTCGTGGC GCTGTTCGGC
GACGGCGGGC TGACCGACCT GGTCGGCGGC ATCGAGGAGT ACCTCCAGCG GAGGGACCGG
CAGAGCGCGG CGGCTGCCGC CCCGGTGGCC GCGGCGACCG TGAAGGCCCC GTCGTCGGCG
GCGGACCAGC GGGCGGCGCG CAAGGAGCTG TCGCGGCTGG AGCGGAGGTT GGAGGCGCTG
CAGAAGAAGG AGGCCGGCCT GCACGCGTCC CTGGCCGAGG CGGCGACCGA CCCGGAGCGG
CTGATGGCGC TGGGGGCGGA GCTGAAGGCC GTGCTGGCGG AGGCGGCGGA GGTCGAGGAG
CAGTGGATGG AGGCGGCGGA GGCCGCTGAG TAG
 
Protein sequence
MANLVNLENV SKSFGVRPLL DGVSLGVGEG DRIGVVGLNG GGKTTLLEVL AGVAEPDDGR 
VSQNRGLRMA VVTQRTTLAE GSTVRDAVIA PLNFAAEHEW AADPRVRSVL DGLGITALGL
DSPVGTMSGG ERRRVALAAA LVQELDLVVL DEPTNHLDVE GVRWLAEHLL ARRTALVVVT
HDRWFLDTVC SRTWEVVGGR VEQYEGGYAD WVYARAERGR LADAAEEKRR NLARKELAWL
RRGAPARTSK PRYRIEAAEA LISDVPAPRD TVELMAFAKR RLGRTVVELE DATLTVGDRT
LVRDLTWRVG PGDRIGIVGV NGSGKTTLLR ALAGERELDG GGKRIEGQTV KLAHLSQELH
DLDGSMRVLE AVEEVARRIV LGKMELSASQ LAERFGFSSQ RQWTPVGDLS GGERRRLQLA
RLLMGEPNVL LLDEPTNDLD IDTLQQLEDL LDSWPGTLVV ISHDRYLVER VCDKVVALFG
DGGLTDLVGG IEEYLQRRDR QSAAAAAPVA AATVKAPSSA ADQRAARKEL SRLERRLEAL
QKKEAGLHAS LAEAATDPER LMALGAELKA VLAEAAEVEE QWMEAAEAAE