Gene Amir_0594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0594 
Symbol 
ID8324753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp655826 
End bp657403 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content65% 
IMG OID644941135 
Producttype III restriction protein res subunit 
Protein accessionYP_003098404 
Protein GI256374744 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTATG TCCGCAGGCA GCTCGGCAAG GACCTGTGTG CCCTGCTAGA CCTCGTCGAG 
GGAGGCACCG CATCGGACGA ACGGCTGCGC GCGGTCGCCC TGGTGGCCAT CGACGCGGAG
CAGCTCGTGT CCGACGAGTC CGGACGCAAG GAGCTGCTCG CTCTGCTGCC GGCCGACAAG
CAGCTTGAGT TGGCGAAGCG GCTCGACGCG GACACGTCTG GCCCGAAGAA CGTTCTGAAC
GCAGTCAACG ATCTGACATG GACGATCGAA CAGCGACGCG AGCTGCTGGA GTTTCTGGGC
TTCACCATCG ACCGGGCGCC CACTCGGACG CCGCTGTTCC GGCAGGACGC TGAGCCGCTC
TACGGCCTGT TCCCACATCA GCGCCGCGCC GCCGCACGGA TCAAGGAGCT GATCTACGAC
GGGCCGCGCC GCGCCGTACT TCACCTGCCC ACCGGTGTCG GCAAAACACG GACCGGCATG
AACCTGATCT GCGACCACCT CCGCGACCGC GAGCCCACCC TCGTTGTGTG GCTCGCTCAT
GGACAGGAGC TGTTGGAGCA GGCCGCGGCA GAGTTCGAAC ACGCGTGGTC GCAGCTCGGT
AACCGTCCGG TGTCCGTGGT GCGCATGTGG GGCAACGCGC CCACGACACT CGACGACGTC
GCGGACGGGG TGGTGATCCT CGGGCTGGAG AAGGCCGTGT CGGCGGCGAA GGGCAGCCCC
GAGTTCCTGC ACACTCTTGC TTCGCGCAGC AGTCTCACGG TGTTCGACGA AGCGCATCAG
ATCATCGCGC CCACGTTCCA GCGTGTCGTG GATGCCCTTA CCATCCGCCC GGACGCCAGT
CTGCTGGGGT TGACCGCCAC TCCGGGACGA ACTTGGGCCG ACATCGCGCA GGACGAGCGG
TTGTCGGACT TTTTCTTGCG GCAGAAGGTG ATGCTGGAGA TCGAGGGTTA CAGCAACCCT
GTCACCGCAC TGATCGACCA GGGCTATCTG GCCAAGCCGA CAATGAGAAC AGTGGCATCG
GACGCGGGCC TGCACCTATC TGCCCGTGAT CGTCAAATGC TCGCCCGCTC GTTCGACATC
CCCGCAGGCA TCGTGGACGC GCTGGCCCAT GATGAGCAAT GGAACCTTAA GGTCGTGCAG
ACGATCATGG ATCTGCTGGC GCGGGAGCAC CGCCGGATCC TCGTGTTCGC CGCCTCGGTG
GATCACTGCC GACTGATCGC CGCTGTGCTG TCCGCGGTCA GCCTCGACGC CGAGTTCATA
ACCGGCGAGT CCTCGCCACG GCACCGAAAG CAGGTCATCA CCCGCTTCAA GGGCACGGGG
CGCCGCCCGA TGATCCTGTG CAACTTCGGC GTATTGACTA CCGGTTTCGA CGCTCCTGCC
GCGAGCGCCG CCGTCATCGC CCGGCCGACC AAATCGCTGG TGCTCTACAG TCAGATGGTC
GGGCGGGTCA TCCGCGGGCC GAAAGCCGGC GGAACCTCCA CTTGCGAGAT CGTCACCGTC
GTGGATCCCG AGCTGCCGGG GTTCGGCGAC GTGGCGGAGG CATTCACCAA CTGGGAAGAT
GTATGGGAGC CCGCGTGA
 
Protein sequence
MSYVRRQLGK DLCALLDLVE GGTASDERLR AVALVAIDAE QLVSDESGRK ELLALLPADK 
QLELAKRLDA DTSGPKNVLN AVNDLTWTIE QRRELLEFLG FTIDRAPTRT PLFRQDAEPL
YGLFPHQRRA AARIKELIYD GPRRAVLHLP TGVGKTRTGM NLICDHLRDR EPTLVVWLAH
GQELLEQAAA EFEHAWSQLG NRPVSVVRMW GNAPTTLDDV ADGVVILGLE KAVSAAKGSP
EFLHTLASRS SLTVFDEAHQ IIAPTFQRVV DALTIRPDAS LLGLTATPGR TWADIAQDER
LSDFFLRQKV MLEIEGYSNP VTALIDQGYL AKPTMRTVAS DAGLHLSARD RQMLARSFDI
PAGIVDALAH DEQWNLKVVQ TIMDLLAREH RRILVFAASV DHCRLIAAVL SAVSLDAEFI
TGESSPRHRK QVITRFKGTG RRPMILCNFG VLTTGFDAPA ASAAVIARPT KSLVLYSQMV
GRVIRGPKAG GTSTCEIVTV VDPELPGFGD VAEAFTNWED VWEPA