Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0594 |
Symbol | |
ID | 8324753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 655826 |
End bp | 657403 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644941135 |
Product | type III restriction protein res subunit |
Protein accession | YP_003098404 |
Protein GI | 256374744 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTATG TCCGCAGGCA GCTCGGCAAG GACCTGTGTG CCCTGCTAGA CCTCGTCGAG GGAGGCACCG CATCGGACGA ACGGCTGCGC GCGGTCGCCC TGGTGGCCAT CGACGCGGAG CAGCTCGTGT CCGACGAGTC CGGACGCAAG GAGCTGCTCG CTCTGCTGCC GGCCGACAAG CAGCTTGAGT TGGCGAAGCG GCTCGACGCG GACACGTCTG GCCCGAAGAA CGTTCTGAAC GCAGTCAACG ATCTGACATG GACGATCGAA CAGCGACGCG AGCTGCTGGA GTTTCTGGGC TTCACCATCG ACCGGGCGCC CACTCGGACG CCGCTGTTCC GGCAGGACGC TGAGCCGCTC TACGGCCTGT TCCCACATCA GCGCCGCGCC GCCGCACGGA TCAAGGAGCT GATCTACGAC GGGCCGCGCC GCGCCGTACT TCACCTGCCC ACCGGTGTCG GCAAAACACG GACCGGCATG AACCTGATCT GCGACCACCT CCGCGACCGC GAGCCCACCC TCGTTGTGTG GCTCGCTCAT GGACAGGAGC TGTTGGAGCA GGCCGCGGCA GAGTTCGAAC ACGCGTGGTC GCAGCTCGGT AACCGTCCGG TGTCCGTGGT GCGCATGTGG GGCAACGCGC CCACGACACT CGACGACGTC GCGGACGGGG TGGTGATCCT CGGGCTGGAG AAGGCCGTGT CGGCGGCGAA GGGCAGCCCC GAGTTCCTGC ACACTCTTGC TTCGCGCAGC AGTCTCACGG TGTTCGACGA AGCGCATCAG ATCATCGCGC CCACGTTCCA GCGTGTCGTG GATGCCCTTA CCATCCGCCC GGACGCCAGT CTGCTGGGGT TGACCGCCAC TCCGGGACGA ACTTGGGCCG ACATCGCGCA GGACGAGCGG TTGTCGGACT TTTTCTTGCG GCAGAAGGTG ATGCTGGAGA TCGAGGGTTA CAGCAACCCT GTCACCGCAC TGATCGACCA GGGCTATCTG GCCAAGCCGA CAATGAGAAC AGTGGCATCG GACGCGGGCC TGCACCTATC TGCCCGTGAT CGTCAAATGC TCGCCCGCTC GTTCGACATC CCCGCAGGCA TCGTGGACGC GCTGGCCCAT GATGAGCAAT GGAACCTTAA GGTCGTGCAG ACGATCATGG ATCTGCTGGC GCGGGAGCAC CGCCGGATCC TCGTGTTCGC CGCCTCGGTG GATCACTGCC GACTGATCGC CGCTGTGCTG TCCGCGGTCA GCCTCGACGC CGAGTTCATA ACCGGCGAGT CCTCGCCACG GCACCGAAAG CAGGTCATCA CCCGCTTCAA GGGCACGGGG CGCCGCCCGA TGATCCTGTG CAACTTCGGC GTATTGACTA CCGGTTTCGA CGCTCCTGCC GCGAGCGCCG CCGTCATCGC CCGGCCGACC AAATCGCTGG TGCTCTACAG TCAGATGGTC GGGCGGGTCA TCCGCGGGCC GAAAGCCGGC GGAACCTCCA CTTGCGAGAT CGTCACCGTC GTGGATCCCG AGCTGCCGGG GTTCGGCGAC GTGGCGGAGG CATTCACCAA CTGGGAAGAT GTATGGGAGC CCGCGTGA
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Protein sequence | MSYVRRQLGK DLCALLDLVE GGTASDERLR AVALVAIDAE QLVSDESGRK ELLALLPADK QLELAKRLDA DTSGPKNVLN AVNDLTWTIE QRRELLEFLG FTIDRAPTRT PLFRQDAEPL YGLFPHQRRA AARIKELIYD GPRRAVLHLP TGVGKTRTGM NLICDHLRDR EPTLVVWLAH GQELLEQAAA EFEHAWSQLG NRPVSVVRMW GNAPTTLDDV ADGVVILGLE KAVSAAKGSP EFLHTLASRS SLTVFDEAHQ IIAPTFQRVV DALTIRPDAS LLGLTATPGR TWADIAQDER LSDFFLRQKV MLEIEGYSNP VTALIDQGYL AKPTMRTVAS DAGLHLSARD RQMLARSFDI PAGIVDALAH DEQWNLKVVQ TIMDLLAREH RRILVFAASV DHCRLIAAVL SAVSLDAEFI TGESSPRHRK QVITRFKGTG RRPMILCNFG VLTTGFDAPA ASAAVIARPT KSLVLYSQMV GRVIRGPKAG GTSTCEIVTV VDPELPGFGD VAEAFTNWED VWEPA
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