Gene Amir_0362 details

Gene Information

• Locus tag: Amir_0362
• ID: 8324520
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 393471
• End bp: 393938
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 644940907
• Product: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_003098177
• Protein GI: 256374517
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.526441
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGGGTCG GCATCGGCAC GGACGTGCAC CCCGTGGAGC CGGGTCGCGA CTGCTGGATG 
GTCGGGCTGC TCTGGGAGGG CGCCGACGGG TGCGCCGGGC ACTCGGACGG GGACGTGGCG 
GCGCACGCGC TGTGCGACGC GCTGCTGTCC GCGGCCGGGC TGGGCGACCT GGGCGCGGTG 
TTCGGCACCA GCGACCCGCG CTGGTCCGGC GCGCACGGCG TGGAGTTCCT GGCGGAGGCC 
CGGCGGCTGG TCGAGGCCGA GGGGTTCGTG GTCGGGAACG CGGCGGTCCA GGTGATCGGG 
AACGCGCCGC GGGTGGGCAA GCGGCGGGCC GAGGCGCAGA AGGTGCTGTC CGAGGTGCTG 
GGCGGCCCGG TCTCGGTGAG CGGGACGACC ACGGACGGGC TCGGGCTGAC CGGGCGCGGC 
GAGGGCGTCG CGGCGGTCGC GACCGCGCTG CTGCTGCCCA AGGGCTGA 

 

Protein sequence

MRVGIGTDVH PVEPGRDCWM VGLLWEGADG CAGHSDGDVA AHALCDALLS AAGLGDLGAV 
FGTSDPRWSG AHGVEFLAEA RRLVEAEGFV VGNAAVQVIG NAPRVGKRRA EAQKVLSEVL 
GGPVSVSGTT TDGLGLTGRG EGVAAVATAL LLPKG