Gene Amir_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0354 
Symbol 
ID8324512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp383896 
End bp384732 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content72% 
IMG OID644940899 
ProductABC-3 protein 
Protein accessionYP_003098169 
Protein GI256374509 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGCC TGTTCGACTT CGCCACGACC GCCGACCTGA TCGGCCTGCC GGTCGTGCAG 
CGCGCGCTCC TGGCCGCCGC CGTCCTCGGC CTGGTCGCCG GGGCCATCGG CCCGCTGGTG
ATCACCCGGA AGATGTCCTT CGCGGTCCAC GGCACCAGCG AGCTGGCCTT CACCGGCGGC
GCCGCCGCCC TGCTGCTCGG CATCAGCGTC AGCTACGGCG CGGTGCTCGG CGCCGTCGTC
GCCGCCCTGC TGCTCGGCCT GCTCGGCCAG CGCGACTCCG AGCGCGACTC GGTCATCGGC
GCGGTGCTCG CCTTCGGCCT GGGCCTCGGC GTGCTGTTCC TGTGGCTCTA CCCCGGCCGC
GCGGCCAACA AGATGGGCCT GCTCGTCGGC CAGCCCATCG GCATCCCCGC CGGTGACGTG
CAGGTGCTGG TGGTCTGCGC CGTCGTCGTG CTGGTGGTCC TCGCGCTGCT GTACCGGCCG
CTGCTGTTCG CCAGCGTCGA CCCGGACGTG GCGCTCGCCA GGGGCGTCCC GGTGCGCGCG
CTGTCCCCGG TGTTCGCGGT CCTGGTCGGC ATCACCACCG CGCTCGGCGT GCAGATCGTG
GGCGCGCTGC TCGTGCTCTC CATGATGATC ACGCCCGCCG CCGCTGCCGC GCGGATCACC
GCGAGCCCGG CCAAGGCCAC CGTGCTCGCG ATCGTGTTCG CCGAGGTCGC CGTGCTCGGC
GGCATCGTGC TCTCGCTCGC GCCCGGCGTG CCGGTGAGCG CATTCGTCAC CGCGATTTCG
TTCGCCATTT ACGTGATCTG CCGGATCGTC GGGAAATCAC GCGTTCGGGC TGTTTGA
 
Protein sequence
MESLFDFATT ADLIGLPVVQ RALLAAAVLG LVAGAIGPLV ITRKMSFAVH GTSELAFTGG 
AAALLLGISV SYGAVLGAVV AALLLGLLGQ RDSERDSVIG AVLAFGLGLG VLFLWLYPGR
AANKMGLLVG QPIGIPAGDV QVLVVCAVVV LVVLALLYRP LLFASVDPDV ALARGVPVRA
LSPVFAVLVG ITTALGVQIV GALLVLSMMI TPAAAAARIT ASPAKATVLA IVFAEVAVLG
GIVLSLAPGV PVSAFVTAIS FAIYVICRIV GKSRVRAV