Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0346 |
Symbol | |
ID | 8324504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 375152 |
End bp | 376255 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644940891 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003098161 |
Protein GI | 256374501 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCGGT CGATGCATGT GCGACGCCCG GCGACGTTGG CCTCTCTGGC CGCGGAGCTG GGGGTTTCCC GGACAACGGT GTCCAACGCG TACAACCGTC CCGACCAGCT CTCGCCGGAG CTGCGACGCC GGGTGTTGGA GACAGCGAGG CGACTTGGAT ATCCCGGCCC CGATCCGGTG GCCAGATCGC TGCGCACGCG CAAAGCGGGC GCGGTCGGTC TGCTGCTGAC CGAGAACCTC TCCTACGCGT TCCGGGACCC GGCGGCGATC GGATTCCTGG AAGGGCTCGC GCTGGCCTGC GAGACGGCCG GGCAGGGGCT GCTGCTCGTG CCCGCCAACC CCGAGCGCGA GGACGTGGCG GCCGTGCACC GGGCGGGCGT CGACGGCTTC GTCGTCTACT CCGTGCCCGA CGACGACCCG CACCTCGCCG CGGTGCTGGA GCGGCCGGTG CCGACCGTCG TGTGCGACCA GCCCGACCTG GCCGACGTCG ACCGCGTGGG CATCGACGAC CGGGCCGCGA TGCACCAGCT CGCGCAGCAC CTGATCGCGC TGGGGCACCG GCGGGTCGGC GTGGTGTGCA TGAGGCTCGC GCGGGACCGC AACGACGGGT TCGTGCCGCT GTCGCGGCAG GAGTCGGCGC ACTTCCACGT GCAGCGGTCC CGGATGAGCG GGCTGCGCCA GGCGTTCACC GAGGTCGGGG TCGACTGGGC CTCGGTTCCG GTGGTGGAGC GGTTCGACCA CACGATCGCG CAAGGCGCCT CGGCGGCGGC CCAGGTCCTG GACCGGGACC CGCAGATCAC GGCGCTGATC TGCACCTCGG ACATACTGGC CCTCGGCGCG CTGCAGGAGG CGGAGCGGCG GGGCCTGCGG GTGCCCGCGG ACCTCACGGT GACCGGGTTC GACGGCATCC GGGAGGCCGA GCAGGCCGGG CTGACCACGG TGCGGCAGCC GGTGCTGGAG AAGGGCCGCG CGGCGGGCAA GCTGCTGATG GAGATCGGCG AGCGCACCAA GCCCAGGACC GTGACGCTGG AGACCGAGCT GATCACCGGC ACGACGGCGG CCGAGCCCAG GACGATCGCC GAGGAGCGGT GGTTCGGGCA CTGA
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Protein sequence | MARSMHVRRP ATLASLAAEL GVSRTTVSNA YNRPDQLSPE LRRRVLETAR RLGYPGPDPV ARSLRTRKAG AVGLLLTENL SYAFRDPAAI GFLEGLALAC ETAGQGLLLV PANPEREDVA AVHRAGVDGF VVYSVPDDDP HLAAVLERPV PTVVCDQPDL ADVDRVGIDD RAAMHQLAQH LIALGHRRVG VVCMRLARDR NDGFVPLSRQ ESAHFHVQRS RMSGLRQAFT EVGVDWASVP VVERFDHTIA QGASAAAQVL DRDPQITALI CTSDILALGA LQEAERRGLR VPADLTVTGF DGIREAEQAG LTTVRQPVLE KGRAAGKLLM EIGERTKPRT VTLETELITG TTAAEPRTIA EERWFGH
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