| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0308 |
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| Symbol | |
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| ID | 8324466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 334943 |
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| End bp | 337993 |
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| Gene Length | 3051 bp |
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| Protein Length | 1016 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644940853 |
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| Product | D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D- al anine-endopeptidase |
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| Protein accession | YP_003098123 |
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| Protein GI | 256374463 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCGAGG AGCCATCGTG GCCGACCGTC GACGGCGACG ACACGGACCG CGAGCAGGTC
AGGAGCCCGC GCCCGGCTGA TCCGCCGACG ATGCGCATCG CGCTGCCGAA GAAGTCGGGC
GGCGCCGAGA AGACCGAGCT GATCAAGATC GACCGGTTGA GGCCGCCCGG CGGGCCGACA
CCGAGGACCG ACCTCCCCGA GGCCGGTGGC GAGTCGGGGG CGGACGCCGC AGCCGCAGCT
CAGCAGCCCT CCGGGGCGCA GCGCGGGACG GCGGCGGAGC AGGGCGCGAC ACCGGCGGGA
CCGGACGGCG ACGAGATCAC GCGGCCCGCG GGCGCGAGCC AGGCGGAAAC CGCCCGACCG
GGTGACGAGG ACAACCGGTC CGGTGGGCAG GCCGGGGCTG GTGGTGCGGG CGCCGGTGGT
GCGGGCGCTG CGGCGCTGGC CGCCGGTGCC GCCGCGCTGG CGGCGGGGGC CGCCGGTGCG
CAGGCAAGTG GTGCGCAGGG GGGTGGTGCG CAGTCCGGTG GCGGACAGGC AGGCGGTGGT
CCTGCGGGCG GCGGGAAGTC CGGCCCCCAG CAGTCGAACG CGCCGCAGTC CGGTGGCGGA
CAGCAGAGTG GCGGACAGCA GACCGGTGAC GGACAGCAGA CCGGTGGCGC GCCTTCGGGC
AGCACCCCGC CCGGTGGCGT CCCCGCACCG GGTATGGCCT CCGGCGCTCC GGCTGGTGGT
TTCCCGGCTC CTGGCACTCC TGCCGGCGGG TTTCCCGCTC CCGGCACTCC GGCGGGTGGG
TTTCCCGCTC CCGGCGGCCT CCTCGGTGGC GAGCCGACGC GGTTCGACCC GCCCAAGTCC
GCCCCGCTGC CCGAGGCCGG GTGGCCGGGG ACGCGGGCCG AGGTGCCCTC GTTCGACCCC
GCGCGCGCCG ACGCCCAGCT CGCCGCGCAG CGCGCCGCCG CCAACCGCGC CCAGAACTCG
GGCCGACCGG AGAGCGGCCA GCAGCAAGCA CCCGGCCAGC AGGGACCTGG TCAGCAAGCA
GGCGGCCAGC AAGCACCCGG TCAGCAAGGG GCCGGTCAGC AAAGTCCTGG CCAGCAGGGA
GCCGGTCAGC AAGGCCCTCA CCAGCAGGGA ATCGGCCAGC AGGGACCTGG TCAGCAAGGA
CCCGGTCACC TAGGGGCTGG CCAGCAGGGG CCCGGTAACC AAGCGGGCGG CCAGCAGGGG
CCCGGCAGGC AGGGGCAGGG CGGCCACGGG AGTGGTCCGC ACGGCACCAT CCCGCCCGGC
GCCATCCCTC CCGGCTCCGG GCAGGCCGGT GCGGGAACGG GTGGGTTCGG GCAGCAGGGA
CCGGGCAGGC AGGGGCCGGG GAGCCAGGGC ATCCGGCACC AGGGTGGTCA GAGCGCGTCC
GAGCAGACCC AGAAGGTCAG CGTCACCCCC GGCCAGTTCA CCTTCCCGCC GCCCGGCCAG
CAGCCCGGCG GTGAGCAGCA CCGCGCCGCG CCGCCCGGCA CCATCCCGCC CGGCGCCAAC
CAGTCCGGCA CCATCCCGCC CGGCGCCAAC CAGTCCGGCA CCATCCCACC CGGCGCCAAC
CAGCCCGGCG TCGCCGACCA CCCCGGCTCC TCCGCCGACC GGCGGGACGA CGACGCGGCC
TTCGCCGCCT TCGCCGCCGA CTCCGACGAG CGGGCCGACG TGCCCGCCCA GCGGTCCAAG
CGCAAGCGGC CCCTGGTGGT CGTCGGCGCG CTCGCCGCCG TGCTCGTCCT GTTCGGCGGC
GCGGCGCTGG CCGCCGTGCA GCTCGGCTGG CTGGAGACCG GGCCCACCTC CACCACCCAG
CCGCCCGCGC CACCGGCCCA GGTCGACCTC GCGGTGCGCG CCCTCGGCCC CGACGCCCCC
GCGCCCACCC CGGCGGGCGT GCAGGCCGTG CTGCAGGGGC CGCTCGCCAA CGGCGCCCTC
GGCAACCTCA CCGGCACCGT CATCGACCCC GCCAGCAAGA CCGTGCTCTG GCACCAGGGC
GAGACCACCC CGCTCGTGCC CGCGTCCACG GTGAAGAACC TGGTCGCCGC AGCCGCGCTG
CTCCAGCTCG ACCACACCAC CCAGTTCACC ACCAAGGTCG TGCAGGGCGC CGAGCCCGGC
ACCGTGGTCC TGGTCGGCGG CGGCGACCCG ACGCTGTCCT CGCTGCCCGA GGGCCGCTCG
TCGGTCTACC CCGGCGCGCC CACCCTGGAC GAGCTGGTCG AGCAGGTGAA GGCCTCCGGG
CCGATCACCG AGGTCGAGTA CGACATCAGC CGCTACAGCG CCGAGCCCGG CCTCGCCCCC
GGCGTCGACC CGAACGACGT CGCGGCCGGC TTCATCACGA ACATCGGCCC GCTGATGCTC
GACGGCGCCC GCTCCGACCC CACCAAGGGC GACACGCCGC GCACCGCCAC CCCCGCGCCC
GACGCCGCGA AGGCGCTGGC CGACCGGCTG GGCGCGACCG TCGGCGGCAA GACCCTCGCG
CCCCAGGCCG CGAAGGTCCT CGGCGAGGTC AAGTCCGTCC CGCTCGACCA GCTGATCGAG
AACATGATGC AGCTGTCGGA CAACGTGCTC GCCGAGACGC TGGCCCGCGA GGTCGCCAAG
GCGCGCAACG CCGAGACCTC CTACGAGGGC GCCACCAAGG CCGTGCGGGA CGTGCTCACC
GAGAACGGCT TCGACCTGAC CGGCGTCATC ACCTCCGACG CCAGCGGCAT GAGCGTGCAG
AACAAGGTCC CCGCCAAGCT CCTCGGCGAC CTGCTCACCG CCGCCGCGCG CCCCGACGCC
GCCACCGACC CGGTCACCAC CCGCCTGCGC CCGCTGCTCA CCGCCCTCGC CGTCGCGGGC
GGCAACGGCA CCCTGAAGGA GCGGTTCGCG CAGTCCCCCG CGGGCAAGGG CTGGATCCGG
GGCAAGACCG GCACGCTCAC CGAGGTGCAC AGCCTCGCGG GCGTCGTGGT GGACACCGAC
GGCAGGCTGC TGGTGTTCGC GTTCATGTCC AACGGCAGCG GCGACGCCCT CGGGGCGCGC
GCCGGGCTCG ACGCGCTGGC CGCCCAGCTC AGGGGTTGCG GCTGTTCGTG A
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| Protein sequence | MPEEPSWPTV DGDDTDREQV RSPRPADPPT MRIALPKKSG GAEKTELIKI DRLRPPGGPT
PRTDLPEAGG ESGADAAAAA QQPSGAQRGT AAEQGATPAG PDGDEITRPA GASQAETARP
GDEDNRSGGQ AGAGGAGAGG AGAAALAAGA AALAAGAAGA QASGAQGGGA QSGGGQAGGG
PAGGGKSGPQ QSNAPQSGGG QQSGGQQTGD GQQTGGAPSG STPPGGVPAP GMASGAPAGG
FPAPGTPAGG FPAPGTPAGG FPAPGGLLGG EPTRFDPPKS APLPEAGWPG TRAEVPSFDP
ARADAQLAAQ RAAANRAQNS GRPESGQQQA PGQQGPGQQA GGQQAPGQQG AGQQSPGQQG
AGQQGPHQQG IGQQGPGQQG PGHLGAGQQG PGNQAGGQQG PGRQGQGGHG SGPHGTIPPG
AIPPGSGQAG AGTGGFGQQG PGRQGPGSQG IRHQGGQSAS EQTQKVSVTP GQFTFPPPGQ
QPGGEQHRAA PPGTIPPGAN QSGTIPPGAN QSGTIPPGAN QPGVADHPGS SADRRDDDAA
FAAFAADSDE RADVPAQRSK RKRPLVVVGA LAAVLVLFGG AALAAVQLGW LETGPTSTTQ
PPAPPAQVDL AVRALGPDAP APTPAGVQAV LQGPLANGAL GNLTGTVIDP ASKTVLWHQG
ETTPLVPAST VKNLVAAAAL LQLDHTTQFT TKVVQGAEPG TVVLVGGGDP TLSSLPEGRS
SVYPGAPTLD ELVEQVKASG PITEVEYDIS RYSAEPGLAP GVDPNDVAAG FITNIGPLML
DGARSDPTKG DTPRTATPAP DAAKALADRL GATVGGKTLA PQAAKVLGEV KSVPLDQLIE
NMMQLSDNVL AETLAREVAK ARNAETSYEG ATKAVRDVLT ENGFDLTGVI TSDASGMSVQ
NKVPAKLLGD LLTAAARPDA ATDPVTTRLR PLLTALAVAG GNGTLKERFA QSPAGKGWIR
GKTGTLTEVH SLAGVVVDTD GRLLVFAFMS NGSGDALGAR AGLDALAAQL RGCGCS
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