Gene Amir_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0295 
Symbol 
ID8324453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp322756 
End bp323649 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content78% 
IMG OID644940840 
Productglycosyl transferase family 2 
Protein accessionYP_003098110 
Protein GI256374450 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.231762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCCGAC CTGACACGAC CGACGCGGTG GTCGACGTCG CGCCGAGCCG CAGGACGGTC 
CGCAGGCCCC GCAGCGTGAG TGTCGTCGTC ACCGCGCACG GCCTGGAGCC CACCGCGGGC
GTCGTGGTCG AGGACGCGCT GCGCGGGCTG GAGGAGCTCG GGGTGCCCGG CGAGGTCGTG
GTCGTGGTCG GGCGCGCCGA CCGCACCGCC CAGGTCGCCC TCACCGCGGG GGCCTCGGTG
GTCGAGTCGC GGCCGGGCCG GGGCGCGGCG GTCCTCGCGG GCGTGGCGGC CAGCCGGGGC
GACGTGGTGT GCCTGCTCGA CGGGGACGTG CGCTACTTCG GCGACCCGCC GCTGGTGCCG
CTGCTGGTCG AGCCGATCCT GGGCGGCCTC GCCGACGCCT GCGTGAGCGA CCTGTACTGG
CGCCCGCCGC ACCCCCGGCT GTGGCTGCAC GGGTTCTTCG CGCCGCTGAT CGGCCGGGTG
TACCCGGAGC TGCTGCCCAG GGCCGGGTCG ACGCCCTGGT CGGGGCAGCG GGCCGCGCTG
CGCGCCCTGT GGCCCGCCGA GCTGCCGGAC GGGGCCACCG CCGACCTCGC GCTGCTGCTG
CACTGGAACC GGGAGGCGGC GCTGCTGCGC CCGGTGCTGG CCGACGACTG GACCGCGCCG
GGCAGGCCGA GGCTGGAGCC CTCGCGCGCG GACCTGGACC TGGTCGTCGC GGACGCGCTG
GCGCACGGGC GGATCGACGA GACCGGGGCG AAGGCGCTGC CGGACTGGTT CGAGGCCGTC
CAGTCGGGCG CGGGGGAGCG CTGGGGCGAC GTGGTCGACC CGGTGGACTT CGCCGCCGCC
GAGCGGGACG TGCTGGAGGA GGCCCTGCGC GAGCTGCGCG CGCACGGGCT GTGA
 
Protein sequence
MRRPDTTDAV VDVAPSRRTV RRPRSVSVVV TAHGLEPTAG VVVEDALRGL EELGVPGEVV 
VVVGRADRTA QVALTAGASV VESRPGRGAA VLAGVAASRG DVVCLLDGDV RYFGDPPLVP
LLVEPILGGL ADACVSDLYW RPPHPRLWLH GFFAPLIGRV YPELLPRAGS TPWSGQRAAL
RALWPAELPD GATADLALLL HWNREAALLR PVLADDWTAP GRPRLEPSRA DLDLVVADAL
AHGRIDETGA KALPDWFEAV QSGAGERWGD VVDPVDFAAA ERDVLEEALR ELRAHGL