| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0294 |
|---|
| Symbol | |
|---|
| ID | 8324451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 321047 |
|---|
| End bp | 322246 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644940838 |
|---|
| Product | DNA-directed DNA polymerase |
|---|
| Protein accession | YP_003098109 |
|---|
| Protein GI | 256374449 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.366047 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCAAGGG GAGTGTGGAG TGAGGTCGTC GGCCAGCCCG ACGCGGTGAC CGTGCTCAGC
GCCGCGGCGG AGGCGGCCGC GGCGATCGTC GCGGGTGGGA CGCCCGCGCC GGGGGCCATG
ACGCACGCCT GGCTGTTCAC CGGGCCGCCC GGATCGGGCC GCACCGAGGC AGCCAGGGCG
TTCGCCGGGG CCCTGCAGTG CACCGCCGCC GACGACCGGC CCGGCTGCGG CGTGTGCGCG
GGCTGCCACA CCGCGCTCGC GGGCACCCAC GCCGACGTGC GCGTGGTCGC CCCCGAGGGC
CTGTCGATCT CGGTGAACGA GATGCGCGCG CTGGTGCAGG TGTCCGCCCG CAGGCCCACC
TCGGGCCGCT GGCAGGTGGT GATCGTCGCC GACGCCGACC GGCTCACCGA GGGCGCGTCG
AACGCGCTGC TCAAGGCCGT GGAGGAGCCG CCGGACCGCA CCGTGTTCCT GCTCTGCGCG
CCCTCCGAGC ACCCGTACGA CGTGTCGGTG ACCATCCGCT CGCGCTGCCG CGTGGTGCGG
CTGGGCTCCC CGAAGGTCCC GGACGTGGCC GCCGCGCTGG AGGAGGAGGG CGTCGCCCCC
GACCTCGCGT CCTGGTCCGC GTCGGTGACC GGCGGCAACG TGGTCAGGGC CCGCAGGCTC
GCCACCGACG AGCAGAGCAG GCTGCGCCGC GAGTCCGTGC TGGCCATCCC GCTCGCGCTG
CGCAGGCCCG CCGACGTGTT CACCTGCGCC GACGACCTGG TGAAGGCCGC CGAGGGCGAC
GCGCTGTCCG CCAACGAGGA CCGCGACGAG CAGGAGCGCA AGGCGCTGGA GACCGCCATG
GGCGCGGGCG GCACCGGCAA GGGCACCGCC TCGGCCACCA GGGGCGCCAA GGGCGCGCTC
AAGGACCTGG AGAAGCGGCA GAAGTCCAGG GCCACCCGGA CCCAGCGGGA CTCGCTCGAC
CAGGCGCTGG TGGACCTGGC CGCGTTCTAC CGGGACGTGC TGGTCACCGC GACCGGCTCC
GAGGCCGCGC TGAACCACCC GGACCGCGCG GCGGACGCCC GGACGGCGGC GGCGGCCTGG
AGCCGTGAGT CGACGCTGCG CAGACTTGAA GCAGTGCTGG CGTGTCGGGG AGCGCTGGAG
CGGAACGTGA AGCCGAGGAT CGCCGTGGAG GCGATGCTGA CGACCCTGCA GCGGGGCTGA
|
|---|
| Protein sequence | MPRGVWSEVV GQPDAVTVLS AAAEAAAAIV AGGTPAPGAM THAWLFTGPP GSGRTEAARA
FAGALQCTAA DDRPGCGVCA GCHTALAGTH ADVRVVAPEG LSISVNEMRA LVQVSARRPT
SGRWQVVIVA DADRLTEGAS NALLKAVEEP PDRTVFLLCA PSEHPYDVSV TIRSRCRVVR
LGSPKVPDVA AALEEEGVAP DLASWSASVT GGNVVRARRL ATDEQSRLRR ESVLAIPLAL
RRPADVFTCA DDLVKAAEGD ALSANEDRDE QERKALETAM GAGGTGKGTA SATRGAKGAL
KDLEKRQKSR ATRTQRDSLD QALVDLAAFY RDVLVTATGS EAALNHPDRA ADARTAAAAW
SRESTLRRLE AVLACRGALE RNVKPRIAVE AMLTTLQRG
|
|---|
| |