Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0291 |
Symbol | |
ID | 8324448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 315457 |
End bp | 318228 |
Gene Length | 2772 bp |
Protein Length | 923 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644940835 |
Product | DNA topoisomerase I |
Protein accession | YP_003098106 |
Protein GI | 256374446 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGGAT CGACGCGGAC GAGGAAGAGC ACCGGGGGAA GTGCGGGCGG CAACCGGCGG TTGGTGATCG TCGAGTCGCC CACCAAGGCG CGCAAGATCG CGTCCTACCT CGGCAACGGC TTCGTCGTGG AGTCGTCCAA GGGGCACATC CGGGACCTGC CGCGCGGCGC GGCCGACGTG CCCGCCAAGT ACAAGGGGCA GCCCTGGGCG CGGCTCGGCG TGGACGTCGA CCACGACTTC GAGCCGCTCT ACATCGTCAC CCCGGACAAG AAGTCGACCG TCGCCGAGCT CAAGGAGCTG CTCAAGGGCG TCGACGAGCT CTACCTCGCG ACGGACGGCG ACCGCGAGGG CGAGGCGATC GCCTGGCACC TGCTGGAGAC CCTCAAGCCC TCGGTCCCGG TGCGCCGCAT GGTGTTCCAC GAGATCACCG AGCCCGCGAT CCTCGCCGCC GCCGCCAGCC CGCGCGACCT GGACCTGAGC CTGGTCGACG CGCAGGAGAC CCGCCGCATC CTGGACCGCC TCTACGGCTA CGAGGTCAGC CCCGTGCTGT GGAAGAAGGT CATGCCGAAG CTGTCGGCGG GCCGCGTCCA GTCGGTGGCC ACCCGCATCG TGGTCGAGCG CGAGCGCGAG CGGATGAAGT TCGTGACCGC CTCGTTCTGG GACGTCTCGG CGACCATCGA CGCGGGCGCC GAGGCCACCC CGCGCCAGTT CGCGGGCAGG CTCGTCTCCG TCGACGGCAC CAGGCTCGCC ACCGGCCGCG ACTTCGGCTC GGACGGCCGC CTCAAGGACG GCGTCGAGGT CAAGGTGCTG GACGAGGCGC ACGCCCGCGC CATCGCCGAG GGCCTGACCG GCGCGGCCAT GCGCGTGGCC TCCGTCGAGG AGAAGCCCTA CACGCGCAAG CCGTACCCGC CGTTCATGAC CTCCACGATC CAGCAGGAGG CGGGCCGCAA GCTGCGCTTC TCCGCCGACC GCACGATGCG GGCCGCGCAG AAGCTGTACG AGAACGGCTA CATCACCTAC ATGCGAACCG ACAGCACCGC GCTGTCGGAG ACCGCCATCA CCGCGGCCCG CGCCCAGGCC ACCGACCTGT ACGGCGCGCA GTACGTGGCC AAGGAGCCCC GGCAGTACAC CCGCAAGGTC AAGAACGCCC AGGAGGCGCA CGAGGCCATC CGCCCGGCGG GCGAGGTCTT CCGCACCCCC GGCCAGGTGG CCCGCGAGCT GGACTCCGAC GAGTACAAGC TCTACGAGCT GATCTGGCAG CGCACCATCG CCTCCCAGAT GGCCGACGCG CGCGGCAACA CCACGAGCGT GCGCGTCGCG GGCCGCACGG GCGGCGGCGA GGACGTGCTG TTCGCCTCCT CCGGCCGCAC GATCACGTTC GCGGGCTTCC TCAAGGCGTA CGTGGAGACG GTCGACTCGG AGGCGGGCGG CAACGCCGAC GACGCCGAGT CCCGGCTGCC GCAGCTGGTC GCCGAGCAGC CGGTGAGCGC CGCCGAGCTG TCCGCCGACG GCCACTCGAC CTCGCCGCCG CCGCGCTTCA CCGAGCCCAG CCTGATCAAG ACCATGGAGG ACCTGGGCAT CGGCCGCCCG TCCACCTACG CGTCGATCAT CAGCACCATC CAGGACCGCG GCTACGTGTG GAAGAAGGGC TCCGCGCTGG TGCCCTCCTG GGTGGCGTTC GCGGTGGTCG GGCTGCTGGA GCAGCACTTC GGCAGGCTGG TCGACTACGA CTTCACCGCC GCGCTGGAGG ACGAGCTCGA CGGCATCGCC GAGGGCCGCC AGGAGCGCAC CACCTGGCTG TCCGGCTTCT ACTTCGGCGG CGACGTCGGC CCCGAGTCCT CGATCGGCCG CTCCGGCGGG CTCAAGAAGC TGGTCGGCTC CAGCGTCGAG GAGATCGACG CCCGCGAGAT CAACTCGATC CCGCTGTTCA GCGACGAGGG CGGGCACACC GTCGTGGTCC GGGTCGGCCG GTACGGGCCG TACCTGGAGC GCGAGGTCGA CGGCGCGTCG CAGCGGGCGA ACCTGCCCGA CGACCTGCCG CCGGACGAGC TGAGCCTGGA GATCGCGGAG AAGCTGTTCG CGACCCCGCA GGAGGGCCGC TCGCTGGGCA ACGACCCGGC GACCGGGCAC GAGATCGTGG CCAAGGAGGG CCGCTTCGGG CCGTACGTCA CCGAGGTGCT GCCCGAGCCC GCCGAGGGCA AGAAGGCCGG GAAGCCTCGC ACCAGCTCGC TGTTCAAGTC GATGTCGCTG GACACCGTGA CGCTGGAGGA CGCGCTGCGG CTGCTGTCCC TGCCGCGCGT GGTCGGCGCC GACCCGGAGT CCGGCGCGGA GATCACCGCG CAGAACGGCC GGTACGGGCC GTACCTCAAG CGCGGCACCG ACTCGCGGTC GCTGACCAGC GAGGACCAGC TGTTCACGGT GACCCTGGAC GAGGCGCTGA AGATCTACGC CGAGCCCAAG AAGCGCGGTC GCGCCGCGGC GGCCCCGCCG CTCAAGGAGC TGGGCAACGA CCCGGTGTCC GGCAAGCCGA TGGTGGTCAA GGAGGGCCGC TTCGGCCCGT ACGTCACCGA CGGCGAGACC AACGCCTCGC TGCGCAAGTC GGACAACGTG GAGACGCTGT CCGACGAGCG GGGCTCCGAG CTGCTGGCGG AGAAGCGGGC CAAGGGGCCG AGCACGAAGA AGAAGCCGGC GGCCAGGACG ACGAAGGCCG CCGCGAAGCC CGCGGCGAAG AAGCCCGCCG CGAAGAAGAC CCCGGCGAAG TCGAAGGGCT GA
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Protein sequence | MAGSTRTRKS TGGSAGGNRR LVIVESPTKA RKIASYLGNG FVVESSKGHI RDLPRGAADV PAKYKGQPWA RLGVDVDHDF EPLYIVTPDK KSTVAELKEL LKGVDELYLA TDGDREGEAI AWHLLETLKP SVPVRRMVFH EITEPAILAA AASPRDLDLS LVDAQETRRI LDRLYGYEVS PVLWKKVMPK LSAGRVQSVA TRIVVERERE RMKFVTASFW DVSATIDAGA EATPRQFAGR LVSVDGTRLA TGRDFGSDGR LKDGVEVKVL DEAHARAIAE GLTGAAMRVA SVEEKPYTRK PYPPFMTSTI QQEAGRKLRF SADRTMRAAQ KLYENGYITY MRTDSTALSE TAITAARAQA TDLYGAQYVA KEPRQYTRKV KNAQEAHEAI RPAGEVFRTP GQVARELDSD EYKLYELIWQ RTIASQMADA RGNTTSVRVA GRTGGGEDVL FASSGRTITF AGFLKAYVET VDSEAGGNAD DAESRLPQLV AEQPVSAAEL SADGHSTSPP PRFTEPSLIK TMEDLGIGRP STYASIISTI QDRGYVWKKG SALVPSWVAF AVVGLLEQHF GRLVDYDFTA ALEDELDGIA EGRQERTTWL SGFYFGGDVG PESSIGRSGG LKKLVGSSVE EIDAREINSI PLFSDEGGHT VVVRVGRYGP YLEREVDGAS QRANLPDDLP PDELSLEIAE KLFATPQEGR SLGNDPATGH EIVAKEGRFG PYVTEVLPEP AEGKKAGKPR TSSLFKSMSL DTVTLEDALR LLSLPRVVGA DPESGAEITA QNGRYGPYLK RGTDSRSLTS EDQLFTVTLD EALKIYAEPK KRGRAAAAPP LKELGNDPVS GKPMVVKEGR FGPYVTDGET NASLRKSDNV ETLSDERGSE LLAEKRAKGP STKKKPAART TKAAAKPAAK KPAAKKTPAK SKG
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