| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0276 |
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| Symbol | |
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| ID | 8324433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 301321 |
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| End bp | 302439 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644940820 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003098091 |
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| Protein GI | 256374431 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCGCTG ATCTGGTGGA GCGGGTCCGG CGCAGGCTCG CCGAGGGCCG CGCCGAGCTC
ACCCCGTCGG CGGTCGCGGC GGCGGTGCGC GGTGAGGCGG GCGGGGTGCT CGGCGACGAG
GAGGTCCTGC GCGCCATGTC CGAGCTGGGC CGCGAGTTCG CGGGCGCGGG CCTCCTCGAA
CCGCTGCTGC GCGCGCCCGG AACGACGGAC GTGCTGGTCA CCGCCCCGGA CCAGGTGTGG
GTCGACGGCG AGGACGGCCT GCGCCGCGCC GACGTGGTGT TCCCCGACGA GCGGGCGGTC
CGCAGGCTCG CCCAGCGGCT GGCCGTGGCG GCGGGCAGGC GCTTGGACGA GGCGGTGCCG
CACGTGGACG GCTGGTTGCC CGGCGCGGTC CGCCTGCACG CCGTGCTGCC GCCGATCACC
CGGAACACCT GCCTGTCCCT GCGCGTCCTG CGCCCGGCGA CGCACGACCT GGCGGAGCTG
CGGGCCAGGG GCGCGTTCAG CGCGGAGGTG GCCGAGGCGC TGCGCGCCCT GGTCCGCTCC
CGCACCGCGT TCCTGGTGGT GGGCGGGACG GGGTCGGGCA AGACCACCCT GCTGGCCGCG
CTGCTCGGCT GCGTCCCGCA CGACCAGCGG GTGGTGTGCG TGGAGGACGC GGGCGAGCTG
GAACCCGACC ACCCGCAGGT GGTCCGCCTG GTGGCGCGGG CGGCGAACGT GGAGGGCGCG
GGCGAGGTGA CCGTCCGGGA CCTGGTCCGC CAGGCGCTGC GGATGCGCCC GGACCGCATC
GTGGTCGGCG AGGTGCGCGG AGCCGAGGTC TGCGACCTGC TCAGCGCGCT GAACACCGGC
CACGAGGGCG GCGCGGGCAC CCTGCACGCG AACTCCCCGG CCGAGGTCCC GGCCCGCCTG
GAAGCCCTGG CCGCGCTCGG CGGCCTGGAC CGGGTGGCGC TGCACAGCCA GGTGCTGGCG
GCGCTCCGGG CCGTCCTGCA CGTCCGCAGG ACCCCGGAGG GCCGTCGCCT GGTGGAGATC
GGCGTGTTCG AGCGCGCGGC GGGCGACCTC CGCGTGGTCC CGGTCTGGCG CCACGACACC
GGCTGGCGGA ACCGCGCGCT GCTGGAGTCG AGCCGATGA
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| Protein sequence | MGADLVERVR RRLAEGRAEL TPSAVAAAVR GEAGGVLGDE EVLRAMSELG REFAGAGLLE
PLLRAPGTTD VLVTAPDQVW VDGEDGLRRA DVVFPDERAV RRLAQRLAVA AGRRLDEAVP
HVDGWLPGAV RLHAVLPPIT RNTCLSLRVL RPATHDLAEL RARGAFSAEV AEALRALVRS
RTAFLVVGGT GSGKTTLLAA LLGCVPHDQR VVCVEDAGEL EPDHPQVVRL VARAANVEGA
GEVTVRDLVR QALRMRPDRI VVGEVRGAEV CDLLSALNTG HEGGAGTLHA NSPAEVPARL
EALAALGGLD RVALHSQVLA ALRAVLHVRR TPEGRRLVEI GVFERAAGDL RVVPVWRHDT
GWRNRALLES SR
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