Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0090 |
Symbol | |
ID | 8324236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 97332 |
End bp | 98516 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644940629 |
Product | Fumarylacetoacetase |
Protein accession | YP_003097910 |
Protein GI | 256374250 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCTGGA TCGAGGACCC GGCGTTCGGG CCGGACCACC CGTTCGGACC GCAAACGCTG CCCTACGGCG TCACCCCGGA CGGCGTGGCC GTCCGGGTGG GCGACCGCGC GCTCCCGCTG CGCCCGCTCG CCGGGTCCTT CGGGCGGCTG GCCGACCTGG TGTCGGCGCC CGACCTGGAC CCCCTGCTGC GCGCGGGCCG TCCCGCGTGG AGCGAGCTGA GGGCCAGGCT GGTCGACCTG GTCACCGCGC CCACCGCCCC GCGCGGCGCG GCGCTCACCG ACCTGGGCGG CGAGATCCTG CCGTTCACCG TCGCCGACTA CGTCGACTTC TACTCGTCCC GGCACCACGC GGAGAACGTC GGCCGGATCT TCCGGCCGGA CGGGGACCCG CTGCTGCCCA ACTGGACCCA CCTGCCGGTC GGCTACCACG GCAGGGCGGG CACGGTCGTC GTGTCCGGCA CGCCCGTGGT CCGCCCGCGC GGCCAGCGCC GCGCCGAGGG CGGCCCGGTC TTCGAGCCCA GCGCCCGCCT GGACGTGGAG GCCGAGGTGG GCTTCGTGTG CGGGGGGCCG CCCGAGTCCC GGCTCACCCC CGACCGCGCC GCCGACCACG TGCTCGGCGT CGTCCTGGTC AACGACTGGT CCGCGCGCGA CGTGCAGGCC TGGGAGTACC AGCCGCTCGG CCCGTTCCTG GCCAAGTCGT TCGCCACCAG CGCGTCGGCC TGGATCACCC CGCTGGAGGC GTTCTCCGCC GCCAGGGTCG CCCCGCCCGC GCTGCCCAAC CCGGTGCTGC CGCACCTGGC GGAGGAGCGG CCGTGGGGGC TCGACCTGAC CCTGGAGGTC GAGTGGAACG GCGAGGTGGT CTCCCGGCCG CCGTTCCGCG AGATGTCCTG GACGTTCGCC CAGCAGCTCG CCCACCTGTC GTCCAACGGC GCCCCGGTGC GCCCCGGCGA CCTGATCGCC TCCGGCACCG TCTCCGGGCC CGGCGTGGAC GAGCGCGGCT CGTTCCTGGA GCTGACCTGG AACGGGCGCG ACCCGGTGGT GGTCGCGGGC GCCGAGCGGT CGTTCCTGGA GGACGGGGAC ACCGTGCGCA TCACCGCCAC CGCCCCCGGC CCCGACGGGT CCGTCGTCGG CCTCGCCGAG GTCGTGGGCG CCGTGCTGGC CGCCGCGCCG GTCCAGGGGC GGTAG
|
Protein sequence | MSWIEDPAFG PDHPFGPQTL PYGVTPDGVA VRVGDRALPL RPLAGSFGRL ADLVSAPDLD PLLRAGRPAW SELRARLVDL VTAPTAPRGA ALTDLGGEIL PFTVADYVDF YSSRHHAENV GRIFRPDGDP LLPNWTHLPV GYHGRAGTVV VSGTPVVRPR GQRRAEGGPV FEPSARLDVE AEVGFVCGGP PESRLTPDRA ADHVLGVVLV NDWSARDVQA WEYQPLGPFL AKSFATSASA WITPLEAFSA ARVAPPALPN PVLPHLAEER PWGLDLTLEV EWNGEVVSRP PFREMSWTFA QQLAHLSSNG APVRPGDLIA SGTVSGPGVD ERGSFLELTW NGRDPVVVAG AERSFLEDGD TVRITATAPG PDGSVVGLAE VVGAVLAAAP VQGR
|
| |