Gene Amir_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0083 
Symbol 
ID8324229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp90632 
End bp91879 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content75% 
IMG OID644940622 
Productarginine deiminase 
Protein accessionYP_003097903 
Protein GI256374243 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2235] Arginine deiminase 
TIGRFAM ID[TIGR01078] arginine deiminase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCGC ACATCGAGCA CACCCAGTCC GCCACCCCCG CGCCCGGACC GGCGCCCAGG 
GTGGACAGCG AGGTCGGCCC GCTGCGCACG GTGCTGCTGC ACCGGCCGGG GGCCGAGCTG
AAGCGGCTGA CCCCGCGCAA CAACGACCAG CTCCTGTTCG ACGGCGTCCC CTGGGTCGAC
CGGGCGCAGG AGGAGCACGA CGCGTTCGCC GGGGTGCTGC GCTCGCGCGG CGTCGAGGTG
CTGCTGCTCG GGGACGAGCT GGTGCGGGCG CTGCACGACG ACCGGGCGCG CATCGCGGGC
GTGCACAGCG CGGTGGACGA GCGCCGCCTG GGCATCCACC TGGCGGACGC GCTGCGCTCG
CACCTGTCCG GCCTGGCCCC CGAGGCGCTG GCGACCATCC TGACCAGCGG CATGACCTTC
GAGGAGCTGC CCGCCGCCGA GGGGGCCTCG CTGGTGCGCC GGATGCACCA GCCCGGCGAC
TTCGCCGTCG ACCCGCTGCC GAACCTGCTG TTCACCCGCG ACTCGTCGGT GTGGGTGGGC
GACCGGGTGG CGATCACCTC GCTGGCGATG CCCGCGCGCG GCAGGGAGAC CGCGCTGACC
GACCTGATCT ACGCCTACCA CCCGCGCTTC GCGAAGACCG GCCGCGCCTA CGGGGCGCAC
TCGGCCCCGC TGGAGGGCGG CGACGTGCTG CTGCTCGCGC CGGGCGTGCT GGCCATCGGC
GTCGGCGAGC GGACCACGCC CGCGGGCGCC GAGTCGTTCG CCCGCTCGGC GCTGGCCGAC
GGGCTGGCGC ACACCGTGCT CGCCGTGCCG ATCGCGCAGC AGCGGGCCAC GATGCACCTG
GACACGGTGT GCACGATGGT CGACCGGGAC GCCGTGGTGA TGTACCCGGC GGTGCGGGAC
AACCTGTTCG CCTACCCGGT GCGCCAGGAC GGCTCGGGCG GGGTGCGGGT GTCCGGGCCG
AGCCCGTTCC TGGAGGCGGC GGCGGAGGCG ATGGGCATCG ACCGGCTGCG GGTGATCGAC
ACCGGGCTGG ACGCGGTGAC CGCCGAGCGC GAGCAGTGGG ACGACGGGAA CAACACGCTC
GCCGTGGGCC CCGGCCTGGT GGTGGCGTAC GAGCGGAACG TGGAGACCAA CGCGCGCCTG
GAGGAGGCGG GGGTCGAGGT GCTGCGGATC AGCGGTTCGG AACTGGGCTC CGGTCGGGGC
GGGCCGCGCT GCATGTCGTG CCCGATCGAC CGCGCGCCGC TGGTCTGA
 
Protein sequence
MTAHIEHTQS ATPAPGPAPR VDSEVGPLRT VLLHRPGAEL KRLTPRNNDQ LLFDGVPWVD 
RAQEEHDAFA GVLRSRGVEV LLLGDELVRA LHDDRARIAG VHSAVDERRL GIHLADALRS
HLSGLAPEAL ATILTSGMTF EELPAAEGAS LVRRMHQPGD FAVDPLPNLL FTRDSSVWVG
DRVAITSLAM PARGRETALT DLIYAYHPRF AKTGRAYGAH SAPLEGGDVL LLAPGVLAIG
VGERTTPAGA ESFARSALAD GLAHTVLAVP IAQQRATMHL DTVCTMVDRD AVVMYPAVRD
NLFAYPVRQD GSGGVRVSGP SPFLEAAAEA MGIDRLRVID TGLDAVTAER EQWDDGNNTL
AVGPGLVVAY ERNVETNARL EEAGVEVLRI SGSELGSGRG GPRCMSCPID RAPLV