| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0069 |
|---|
| Symbol | |
|---|
| ID | 8324215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 77504 |
|---|
| End bp | 79315 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644940608 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_003097889 |
|---|
| Protein GI | 256374229 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCAGA ACCTGTGGAG CCTGAGCCTG GTCGCCGTGG TCGCGGTGGT CACGTTCCTG
CTGGGCTACG TGGGTTCCCG CCGGGCCAAC ACGACCCCGG ACTTCCTGGT CGCCCGGCGC
GCGGTGCCCG CCACCCGCAA CGCGGCGGCG ATCTCCGGCG AGTACCTCTC GGCGGCCTCG
TTCCTCGGCG TCGCCGGGCT GATCCTCAAG GACGGCGTCG ACGCGCTCTG GTACCCGATC
GGCTTCACCG CGGGCTACCT GGCGATGATG CTGTTCGTCG CCGCGCCGCT GCGCCGCTCG
GGCGCGTACA CCCTGCCCGA CTTCGCCGAG GCGCGGCTCG GGTCGCGCAA GCTCCGGCAC
TTCTGCACGT TCTTCGTGGT GTGCATCGGG GTGCTGTACC TGGTGCCGCA GCTGCAGAGC
GCCGGGCTGA CCCTGAACAC GATCACCGGG CTGCCCGCGT GGCTGGGCGG CGTGCTGGTG
ACGCTGATCG TGGTGGCGAA CGTGCTCGGC GGCGGGATGC GGGCGATCAC GCTGGTCCAG
GCGTTCCAGT ACTGGGGCAA GCTGTTCGCC ATCTCGGCGC CGACGTTCGT GCTGTTCGCG
GTGTTCCTGA CCGGGCCGGG CACCAGCGCG CAGTCCGTGG ACGCCGAGGG CGTGCTGCTG
TTCCACGAGC CGGTCACCGT GACCACCGTC GACCCGGTGC GGCTGGAGGT GACCTCGCTG
ACCAAGCTGC ACGTGGTCGG CGAGGTGGAC GGGGCGCGCG CGGACGGGCC CGCGTACTGG
GGGCCGGACT CGGGTGGCGC GCCGAAGACG TACTCGGTGG CCAAGGGCAC CGAGCTGCGG
TTCACGGCGG GCTCGCCGGT GCCGGTGGTG GAGGGAGCGC CGAGCGCGAA CGACGTGTGG
CTGCGCCCGC AGACCGACGG GCTGGGCGGG CTGTTCGAGA CCTACTCGCT GATCTTCGCG
ACGTTCCTGG GCACGATGGG GCTGCCGCAC GTGCTGGTGC GGTTCTACAC GAACCCGGAC
GGCAAGGCGG CGCGGCGCAC GGCGCTGCAC GTGCTCTACC TGCTGGGGCT GTTCTACGTC
TTCCCGACCG TGCTCGGGGT GATCTCCCGG CTGTACCTGC CGCAGCTGCT GGTGACCGGC
AAGACCGACG CGGCGGTGCT GCTGCTGCCG CACACGATGC TGCCGGGGGT GCTCGGGCAG
ATCCTCGGGG CGGTGGTGGC GGCGGGCGCG TTCGCGGCGT TCCTGTCCAC CTCGTCCGGG
CTGGTGGTGA GCGTCGCCGG GGTGGTGTCC ACGGACATCC TGCGCGGCAA GGTGCGGGAC
TTCCGGTGGG CGACGGTGCT GACCGGCGCG GTCGCGATCG GGCTCGCGCT GCTGCTGCCG
CGCAGCGACG CCTCGCTGAC CGTGGCGATG TCGTTCGCGC TGGCCGCGTC GACGTTCTGC
CCGCTGCTGC TGCTGGGGAT CTGGTGGCGG GGGCTGACCT GGGTCGGGGC GGTGGCCGGG
CTGGTCGTCG GCGGCGGACT GGTGATCCTG TCGCAGGTGG TGACGGCGGT GAGCAAGGCG
ACGGGGGACT GGGCGCCCGC GCTGCTGGCG CAGCCCGCGC TGGTGACGGT GCCGATCGCG
TTCCTGACCA TGATCTGGAT CAGCAAGCTG ACCGGGCCGA GCAGGCCCGC GGACGTGAAC
CAGGTGCTGC TGCGGCTGCA CGCGCCCGAC CGGCTGGGGT TCATGCGCGA CCGGGGGGCG
CGGTTCGCGT CCGGGGGCGC GCGCAGGGCG GGCGAGGGGC AGCACCGGGG CGCGGCGGGG
TCGGGGGGCT GA
|
|---|
| Protein sequence | MVQNLWSLSL VAVVAVVTFL LGYVGSRRAN TTPDFLVARR AVPATRNAAA ISGEYLSAAS
FLGVAGLILK DGVDALWYPI GFTAGYLAMM LFVAAPLRRS GAYTLPDFAE ARLGSRKLRH
FCTFFVVCIG VLYLVPQLQS AGLTLNTITG LPAWLGGVLV TLIVVANVLG GGMRAITLVQ
AFQYWGKLFA ISAPTFVLFA VFLTGPGTSA QSVDAEGVLL FHEPVTVTTV DPVRLEVTSL
TKLHVVGEVD GARADGPAYW GPDSGGAPKT YSVAKGTELR FTAGSPVPVV EGAPSANDVW
LRPQTDGLGG LFETYSLIFA TFLGTMGLPH VLVRFYTNPD GKAARRTALH VLYLLGLFYV
FPTVLGVISR LYLPQLLVTG KTDAAVLLLP HTMLPGVLGQ ILGAVVAAGA FAAFLSTSSG
LVVSVAGVVS TDILRGKVRD FRWATVLTGA VAIGLALLLP RSDASLTVAM SFALAASTFC
PLLLLGIWWR GLTWVGAVAG LVVGGGLVIL SQVVTAVSKA TGDWAPALLA QPALVTVPIA
FLTMIWISKL TGPSRPADVN QVLLRLHAPD RLGFMRDRGA RFASGGARRA GEGQHRGAAG
SGG
|
|---|
| |