Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0066 |
Symbol | |
ID | 8324212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 75285 |
End bp | 76157 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644940605 |
Product | peptidase S49 |
Protein accession | YP_003097886 |
Protein GI | 256374226 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTGA CCGACAAGAT CGCCTCGCGG CTCCCGAAGA TCGTCGGCGA CCGGGTCGAC CGCGGCCCGG TCGTCGCCGC GGTCCGGCTG CACGGGGTCA TCACCCCGAA CCCCGGACCG GTCGCCGCGC GCGGCAGCCT GAACGCCCAG TCCGTCGAGT CCGCGCTGAC CCGCGCCTTC GAGCACGAGC GCCTGGTCGC CGTGGCGCTG CTGGTGAACT CGCCCGGCGG CGCCCCGACC CAGTCCGCGC TGATCGCCGA CCGCGTCCGC GAGCTGGCCG CGAAGCGCCG GGTGCCCGTG CTGGCGTTCT GCGAGGACGT CGCGGCCTCC GGCGGCTACT GGCTGGCCTG CGCCGCCGAC GAGATCCACG CGCACCCCAC CTCGCTGGTC GGCTCCATCG GCGTCGTCAG CTCCGGGTTC GGCCTCACCG GGCTGATGGA GCGCTTCGGC GTCGAGCGCC GGGTGCACAG CGCGGGCGAG AGCAAGGTGC GGCTCGACCC GTTCCAGCCG GAGAAGGCCG AGGACGTGGC CTGGCTGGAA GGTCTCCAGT CCGAGCTGCA CGAGCAGTTC AAGGCGTGGG TCACCGAGCG CAGGGGGCGC AGGCTGGCCG CCGACGCGCC CGACCTGTTC GCCGGCGAGG TCTGGACCGG GGCCAAGGCG CTGGAGCTGG GGCTGGTCGA CGGGCTGGGC ACGCTGCGCG GCGTCATCGG CAAGCGCTAC CCCGACGCCG AGATCGCCAT CGCCGAGCCC CGCAGGAACC TGCTCAGCAG GCTCGGCCTC GGCAACGCGG CGTCCACACG ATCGGGTGAC TTCGTGACGC AGGCGCTGGC GAGCCTGGAG GAGCGCGCGC GCTGGTCCCG ATTCGGCTTG TGA
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Protein sequence | MSVTDKIASR LPKIVGDRVD RGPVVAAVRL HGVITPNPGP VAARGSLNAQ SVESALTRAF EHERLVAVAL LVNSPGGAPT QSALIADRVR ELAAKRRVPV LAFCEDVAAS GGYWLACAAD EIHAHPTSLV GSIGVVSSGF GLTGLMERFG VERRVHSAGE SKVRLDPFQP EKAEDVAWLE GLQSELHEQF KAWVTERRGR RLAADAPDLF AGEVWTGAKA LELGLVDGLG TLRGVIGKRY PDAEIAIAEP RRNLLSRLGL GNAASTRSGD FVTQALASLE ERARWSRFGL
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