Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0057 |
Symbol | |
ID | 8324202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 65703 |
End bp | 68078 |
Gene Length | 2376 bp |
Protein Length | 791 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644940595 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003097877 |
Protein GI | 256374217 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.169678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACGC CGGTCGCCTG CACCGCCACC GCCGAGAGCG GACTGCCGTC CGCGCTGGTG CTCGCGAGGT CCTACCTCGC CCACCACCCC GGCCACCGGT TCACCATCGC CGTGCTGGAC GGCGAGGACG GTGGCAGGCG CGGCTCGGAC GGCGTCACCG TCATCGGCCC CGACCTGATC GGCCCGTCCA GGGACGAGTT CCTGGGCCTG GCCACCGCGC ACCCGCTGCC GCAGCTGGTC GACGCGGTCA AGCCGTGGCT CATGCGCGGG CAGCTCAGGA ACGCCTCCAG GGTCACCTGG TTCAGCCCCA CCTCGTTCGT CACCGCCCCG ATCGGCGAGC AGCGCGGCAC CGTCGTCGCC CCGCACCTGC TGCGCCCGCT GACCGGCGAG GCCGCCGAGT CGGCCGAGGC GCGCCTGATC GGCACCGGCG TGCTCAACCC CGGCTACCTG TCCACCGACG ACGAGTCCCT GCTGGACGCC TGGGTCGAGG CGGTCGCCGC GTTCCGGGCC GTCCGGTTCG ACCGGGACGC GCTGAGCGAC CAGGACTGGT TCGACCAGGC GCTGTCCCTC GTCCCGCACG AGGTCTCCAC CGACCCCGGA TTGGTGCTGA CGGCGTGGAA CGCCTTCGAG CGCCCCGGAG TCGAACCGAA GGTGGTGGAC CTCCTCGGCT TCGAACCGCG CGCCCCGTGG GTGCTCAGCT CGCTGCTGCT CGACCGCCCC GCCGCGCTGC TGTCCGAGCG CCCCGACCTG GTCCCGCTCG TGCGCGAGTA CGCCGACCTG CTGATCGCGG CCGGGCACCT GGACGAGGAG GAGGTGCTGC CGACCTGGCT GGACGAGCTG CCCGACGGCA CCCCCCTCAC CCCGCTGCTG CGCGGGACCT ACCGGGCCGC CGTGCTCGCC TCCACCGACC CGCGCCGCGC CAAGCGCCCC GCCGCGCCGC CGCACGCGTT CACCGGCGCG GAGTTCCGGG ACTGGCTCAA CGGCCCCGGC GAGCTGGGCG GCACCACCCG CTTCACCAGG GCCGTGTGGG ACAGCCGCCC CGACCTGCAG GCCGTGTTCG GCAGGCCGGT GCACCCCGGC TTCGCGCACT GGTGCCGCGA GTCCGCGCCC GCCGAGGGCG TGCTGCCCGC GTGGGCCGTC CCCGTGCCGG ACGACCCGCC GTCGGCGCCG CAGGACCGGC TCGGCGTGAA CCTGCTCGGC CACCTGACCG CCGTGCTCGG CGTCGGCGAG CTGGGCCGGG TGCTGAACTC GGCGCTGTCC CGGTCCGGGC TGGACGTGGC GCCCGTGGTC GAGGAGGCGA TGGTGGTCAA CCGGACCGAC GTCGACCGCC CCGAGGAGAG CGCGCCGGTG TACCCGGTGA GCGTGCTGTG CGTGAACGCC GACCTGGTGC GCGCGGTGTC CGAGCAGCAC CCGCAGGTGG TGCACGAGCG CTACCGGATC GGCGTGTGGT CGTGGGAGCT GGAGGAGTTC CCCGAGGCGA TGCGCGAGTT CGACTGCGTC GACGAGGTGT GGACCATCAG CGAGTACTGC CGCGCCGCGA TCGCCCCGCA CACCGACAAG CCGGTGCGGG TGTTCCCGAT CCCGATCCGC GAGCGCCCCG CCGTGGAGTT CCGCGCGGGC GGGCCGGTGC GGTTCCTGTT CGCCATGGAC TTCAACTCGC TGGTGGAGCG GAAGAACCCG TTCGGCGCCG TCGAGGCGTT CCGCCGGGCG TTCCCGGACC GCGAGGACGT CGAACTGGTC GTGAAGGTGA TCAACGGCGA GCGGCACGTG GCCGGGCTGG AGCGGTTGCG CTCCGCCGCC GCGGGTGACC CGAGGGTGAC GCTGCTTGAG CGCTACCTCA CGGCCGAGGA GTTGCACGAC CTCTACGCCG GGAGCGACTG CTACGTTTCT CTCCACCGCG CGGAGGGCTT CGGCTTCACC GTCGCGGAGG CGATGGCGAT GGGCTTGCCG GTGATCACCA CCGACTACTC GGGCACCGCC GAGTTCGTCG ACCGGGAGAA CTGCTGGCTC GTGCCCGCCG AACCGGTTCC GGTCGGTCCC GGCTCCCCGC CCTACCCGGC GGACGCGCTG TGGGCCGACC CGGACCTGGA CGTGGCGGCG GCGGCCATGC GCGAGGTCGC CGACGACCCC GCGCGCGCGG CCGAGCGCGG CCTGGCCGCC CGCGAGCACC TGCGCCGCAC CAGGGGCGAG GACGCCGCCG CGGAGTGGGT GCGCGACCGG GTCGAGCAGG CGCACCGGAC GTGGCGGGAG CGGAGGGCCC CGGCGCAGGC GCAGGCGGCC CCCGAGGCAA AGCCTCAGCT GGTGGTCCCG CTGCTGCGCA AGGTCGCGGT GCGGGCGCTG GGCCGGTACG ACAGCGCGCG CCACCGGGAC CGGTGA
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Protein sequence | MNTPVACTAT AESGLPSALV LARSYLAHHP GHRFTIAVLD GEDGGRRGSD GVTVIGPDLI GPSRDEFLGL ATAHPLPQLV DAVKPWLMRG QLRNASRVTW FSPTSFVTAP IGEQRGTVVA PHLLRPLTGE AAESAEARLI GTGVLNPGYL STDDESLLDA WVEAVAAFRA VRFDRDALSD QDWFDQALSL VPHEVSTDPG LVLTAWNAFE RPGVEPKVVD LLGFEPRAPW VLSSLLLDRP AALLSERPDL VPLVREYADL LIAAGHLDEE EVLPTWLDEL PDGTPLTPLL RGTYRAAVLA STDPRRAKRP AAPPHAFTGA EFRDWLNGPG ELGGTTRFTR AVWDSRPDLQ AVFGRPVHPG FAHWCRESAP AEGVLPAWAV PVPDDPPSAP QDRLGVNLLG HLTAVLGVGE LGRVLNSALS RSGLDVAPVV EEAMVVNRTD VDRPEESAPV YPVSVLCVNA DLVRAVSEQH PQVVHERYRI GVWSWELEEF PEAMREFDCV DEVWTISEYC RAAIAPHTDK PVRVFPIPIR ERPAVEFRAG GPVRFLFAMD FNSLVERKNP FGAVEAFRRA FPDREDVELV VKVINGERHV AGLERLRSAA AGDPRVTLLE RYLTAEELHD LYAGSDCYVS LHRAEGFGFT VAEAMAMGLP VITTDYSGTA EFVDRENCWL VPAEPVPVGP GSPPYPADAL WADPDLDVAA AAMREVADDP ARAAERGLAA REHLRRTRGE DAAAEWVRDR VEQAHRTWRE RRAPAQAQAA PEAKPQLVVP LLRKVAVRAL GRYDSARHRD R
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