| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0056 |
|---|
| Symbol | |
|---|
| ID | 8324201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 64376 |
|---|
| End bp | 65581 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644940594 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003097876 |
|---|
| Protein GI | 256374216 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.227027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACTGGC AGGAGGAACT GCGCAAGCTG GACGAGGAGC TTGCCGCAGG GCGGATCTCG
GCCGACGACT ACCGGACCCG CCGGGACCAG GTGCTGTCCT CGGCCCAACC CGCCGCCCAG
CCAGCGCCGC CGCAGGAGTG GCAGGCGCAG CAGCCCTCGG GCGGGCCCTC GAACGGCCCC
ACCGGCACCA GCACCGGGGC CACCCAGTAC ATCCAGCCGG TGAACCCGGA CGCCACCCAG
GTCGTGCCCG GCGGCGGCAA CCGCCCCGGC CACAACCCGG ACGCCACGCA GGTGGTGCCC
GGCGGCGGCA ACCGGCCCGG CGACTCGGAC CGCACCCAGG TCGTGCCGAA CGGCGGGATG
GCACCGCAGT ACGGCCAGCC CTCGCCGGCG GGCGGCTTCC CGCAGCCCGG CGCGTTCGGC
GGCCCGCAGC AGGGCGGCGG GATGCCGCCG TGGCAGGGCG GTGGCGGGGA CACGTCCGCG
CCGTGGGCGT CGTCGTCGAG CGACAACTGG CTGCGGCAGG GCCCCGAGGT GTTCGACGAG
GGCTCGTCCG GCGGCGGCAA GAAGGTCTTC GCGATCATCG GCGTCGTGCT GGTGGTAGCG
CTGATCGGCG GCGCGGTGTG GTTCTTCGGC TTCAAGGGCT CCGGCGACGA CTCGGCCAAG
GGCGGCGACA CGCCCGCCCC GCAGTCGTCC ACCTCGGCGC CGACCACGAC CACCACCAAG
GCGCCGATCG ACCTGCTGCC CGACCCGCCC GGCACGCCGA GCACCAACAA CGGCACGGTC
GAGCTGGCGC GCGCGGTCGA GGAGAAGCTG CTGAGCGCCG ACGAGGCCGC CGCCGTCGAG
GAGGCCGCCG TCAAGGAGGT CGCGTTCGTG GGCAGCACGC AGGACGCGTT CACCTACGAC
GCCATGGTGT TCGAGGTCGG CGACGAGGCC AAGGCCGAGG CGCTGGTCGA GGGCCTGGTC
GCGGCGCAGG GCAAGACCGG CATGGTGGAC GGGGCCAAGG GCCAGCTGCC CGCGCAGTCG
ACGGTGCAGC AGCTGATCCG CCAGGGCGAG CCCGGCATCT ACCGCGCGAT CTACGCGGCG
GGTGACAAGG TCGTCCGGGT CTCCACCACG CAGACCCCGA TCGCGCCCGG CCCGAACGAC
CAGGAGCTGA TCAAGAAGTT CCAGGAGTTC GGCATCGGCG TGGCGAAGCA GTTCCCGACC
TCCTGA
|
|---|
| Protein sequence | MNWQEELRKL DEELAAGRIS ADDYRTRRDQ VLSSAQPAAQ PAPPQEWQAQ QPSGGPSNGP
TGTSTGATQY IQPVNPDATQ VVPGGGNRPG HNPDATQVVP GGGNRPGDSD RTQVVPNGGM
APQYGQPSPA GGFPQPGAFG GPQQGGGMPP WQGGGGDTSA PWASSSSDNW LRQGPEVFDE
GSSGGGKKVF AIIGVVLVVA LIGGAVWFFG FKGSGDDSAK GGDTPAPQSS TSAPTTTTTK
APIDLLPDPP GTPSTNNGTV ELARAVEEKL LSADEAAAVE EAAVKEVAFV GSTQDAFTYD
AMVFEVGDEA KAEALVEGLV AAQGKTGMVD GAKGQLPAQS TVQQLIRQGE PGIYRAIYAA
GDKVVRVSTT QTPIAPGPND QELIKKFQEF GIGVAKQFPT S
|
|---|
| |