Gene Amir_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0030 
Symbol 
ID8324175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp33316 
End bp34593 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content74% 
IMG OID644940568 
ProductFAD-linked oxidoreductase 
Protein accessionYP_003097850 
Protein GI256374190 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR01679] FAD-linked oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACCCC CCTGGACGAA CTGGGCGCGG ACCGAGACCG CAGCCCCGAT CCGGGTCGAG 
CACCCCACGA CGGCGGAGGG GATCTCCGAA GTCGTCCGCA CCGCCGACGC CGTCCGCGCG
CGGGGCAGCG GCCACTCCTT CACCGGGGTC GCCGTCGCCC CCTCCGTCGC GCTCGACCTC
GACCGCTGGA CCGGCCTGGT CGACGTGGCG GGAGAGCTGG TGACCGTCCG CGCGGGCACC
ACGCTCCGGC AGCTCAACGA GCTGCTGCAC CGGGAGGGGC TCGCGATGCC CAACCTCGGC
GACATCGACG CCCAGACCAT CGCGGGCGCC ACCGCCACCG GCACCCACGG CACCGGCGCG
GCGCTCGGCG GCCTGGCCAC CACGATCGTC GCGCTGGAGG TCGTGCTCGC CGACGGCTCG
CTCGTCCGCT GCTCCCCCAC CGAGCGCCCC GACCTGTTCG AGGCGGCCAG GCTCGGCCTC
GGCGCGGTCG GCGTGATCAG CACGCTGACC CTGCGCTGCG TGCCGTCGTT CGTGCTGCAC
GCCCGCGAGT ACCCGGCCAG GCTCGACGCG GTGCTGGAGG AGTTCGACCA CCTCACCGCG
ACCGAGGACC ACGTGGAGTT CCACTGGTTC CCGCACGGCG ACCGGGTGAT CGTCAAGCGG
AACAACCGGG TGGACGAGCC GCGCGCGCCG CTGTCCGGGC TGCGCCGGTT CTACGAGTAC
GACGTGATGG AGAACGCCGC GTTCGGCGCG GTGTGCAAGG TCGCCCGCGC CGTGCCCGCC
ACGGCCAGGG GGCTCAACCG GATGTGCGGG GCGCTGATCG GCGAGCGCGA CTACCGCGAC
CAGTCGCACC GCGTCTTCAC CACCCCGCGC CGGGTGCGGT TCGTGGAGAC CGAGTACGCG
GTGCCCCGCG CCGAGCTGCA CGGGGTGCTG CGCGAGCTGC GCGCCGCCGT GGCCGGGCTG
GAGCACGGGG TGATCGTGCC GGTGGAGGTG CGGGTCGCGC GGGGCGACGA CATCTGGCTG
TCCACCGCGC ACGGGCGGGA CACCGCCTAC GTCGCGGTGC ACCAGTACGT GGGGATGCCG
CACCGGCGGT ACTTCGACGC GTTCGAGCGG ATCGCGCTGG CGGTGGGCGG CAGGCCGCAC
TGGGGCAAGC TGCACTCGCT GGGCGCCGAG GAGCTGGCGA CCCGCTACCC CCGGTTCGCG
GACTTCCGCC GCGTGCGCGC CGAGGTCGAC CCGGACCGGA AGTTCGGGAA CCGGCACCTG
GAGCGGGTGC TGGGCTGA
 
Protein sequence
MAPPWTNWAR TETAAPIRVE HPTTAEGISE VVRTADAVRA RGSGHSFTGV AVAPSVALDL 
DRWTGLVDVA GELVTVRAGT TLRQLNELLH REGLAMPNLG DIDAQTIAGA TATGTHGTGA
ALGGLATTIV ALEVVLADGS LVRCSPTERP DLFEAARLGL GAVGVISTLT LRCVPSFVLH
AREYPARLDA VLEEFDHLTA TEDHVEFHWF PHGDRVIVKR NNRVDEPRAP LSGLRRFYEY
DVMENAAFGA VCKVARAVPA TARGLNRMCG ALIGERDYRD QSHRVFTTPR RVRFVETEYA
VPRAELHGVL RELRAAVAGL EHGVIVPVEV RVARGDDIWL STAHGRDTAY VAVHQYVGMP
HRRYFDAFER IALAVGGRPH WGKLHSLGAE ELATRYPRFA DFRRVRAEVD PDRKFGNRHL
ERVLG