Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0029 |
Symbol | |
ID | 8324174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 32468 |
End bp | 33103 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644940567 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003097849 |
Protein GI | 256374189 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.825731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCTTG TGATCGCGGG AGGGCACGGG AAGATCGCGC TGCACGTCCA GCGGCTGCTG GCGGCCGGCG GGGACGCGGC CACCGCGCTG GTCCGCAACG AGGACCACTT CGCGGACGTG ACCGAGGCGG GCGGGGTGCC GGTGCTGTGC GACCTGGAGG CGAGCGATGT CGCCTCGGTC GCCGAGTACC TGACCGGCGC GGACGCGGTG CTGTTCGCCG CGGGCGCCGG GCCCGGCAGC GGGGTGGGGC GCAAGGACAG CGTGGACCGG GGAGCCTCCG CGCTCCTGGC GGACGCCGCC GAGCGGGCGG GCGTGCGCAG GTTCGTGCAG ATCAGCTCGG CGGGCATCGG CCGGACCACC GGCGACGAGG TGTTCGACGC CTACCTGCTC GCCAAGGGCG CGGCCGAGGA GGACCTGAAG GCCCGCGACC TGGACTGGAC GATCGTCCGG CCCGGCAGGC TGACCGACGA GCCCGCGACC GGCGCGGTCC GGCTCACCGA GGGGGACGCT CAGGACGGGT CCGTGCCGCG CGCCGACGTG GCCGCCGTGG TCGTGGCGGT GCTGGCGCAG CCGTCGTCGG TCGGGAAGAC CTACGAGCTG ATCTCCGGCG AGACCCCGGT CCAGGACGCG ATCTAG
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Protein sequence | MRLVIAGGHG KIALHVQRLL AAGGDAATAL VRNEDHFADV TEAGGVPVLC DLEASDVASV AEYLTGADAV LFAAGAGPGS GVGRKDSVDR GASALLADAA ERAGVRRFVQ ISSAGIGRTT GDEVFDAYLL AKGAAEEDLK ARDLDWTIVR PGRLTDEPAT GAVRLTEGDA QDGSVPRADV AAVVVAVLAQ PSSVGKTYEL ISGETPVQDA I
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