| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0014 |
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| Symbol | |
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| ID | 8324158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 15317 |
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| End bp | 16213 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644940551 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003097834 |
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| Protein GI | 256374174 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGGCA CTCCGGTACC ACCCGGCGGC CCGATCGGGG CGCAACCAGG CCAAGCGGCC
TGCGCGCGAC ACCCCGATCG GGCCACCGGC CTGCTGTGCG CGCGGTGCGA ACGCCCCGCC
TGTCCCGACT GCCTGCGCGA GGCGGCCGTG GGCTTCCAGT GCGTCGACTG CGTCACCGAG
GGGGCCCGCA CCACGCGGCA GGCCCGCACG GTGGAGGGCG CCACGCACGC CTCGACGGGG
CGCAGGCTCC TCGTGGTCCC CGTGCTCATC GTCGTCAACC TCGCGCTGTT CGCGCTGACC
GCCTACCTCG GCGGCGGCGT GACCGACCGG GACGTCTTCC AGAGCGACGT GACCCAGGAG
GGGGCGCTCG TCCCCTACTT CGTCGCGCTC GGCGAGTGGT GGCGCCTGGT CACGTCCGGC
TTCCTGCACC TGGGCGTCAC GCACATCGGC CTCAACATGG CCTCGCTGTA CATCCTCGGG
CGCGACCTGG AGCCCGTGCT CGGGCGCGCC AGGTTCCTCG CGGTCTACCT GCTGTCCCTG
CTGGGCGGCA GCGCGTCCGT GTACCTGTTC GAGGAGGTCG TCTCCCTCAC GGCGGGCGCG
TCGGGCGCGA TCTACGGCCT GATGGGCTCC CTGCTCGTCG TGCTGCTCAG GCGGCGGCTC
AACGCCACCC CGGTGCTGGC GATCATCGCC ATCAACGTGT TCCTGAGCTT CTCGCTGCCC
AACATCTCGA TCCTCGGGCA CCTGGGCGGC ATCGCGGTCG GCGCGGCGGT CACCGCGGCG
CTGGTCTACG CGCCGCGCGG GCCGCAGCGG GCCAGGTGGC AGGCGGGTTC GGTCGTGGCG
TTCGCCGTCG CGCTGGTCGT GCTCACCGTT GTCCGCACCG CCGTGCTCGT GGGCTGA
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| Protein sequence | MAGTPVPPGG PIGAQPGQAA CARHPDRATG LLCARCERPA CPDCLREAAV GFQCVDCVTE
GARTTRQART VEGATHASTG RRLLVVPVLI VVNLALFALT AYLGGGVTDR DVFQSDVTQE
GALVPYFVAL GEWWRLVTSG FLHLGVTHIG LNMASLYILG RDLEPVLGRA RFLAVYLLSL
LGGSASVYLF EEVVSLTAGA SGAIYGLMGS LLVVLLRRRL NATPVLAIIA INVFLSFSLP
NISILGHLGG IAVGAAVTAA LVYAPRGPQR ARWQAGSVVA FAVALVVLTV VRTAVLVG
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