Gene Amir_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0005 
Symbol 
ID8324147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6031 
End bp6462 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content75% 
IMG OID644940540 
Productprotein of unknown function DUF721 
Protein accessionYP_003097825 
Protein GI256374165 
COG category[R] General function prediction only 
COG ID[COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00151548 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGAGCA GGCGCGCCAC CGGCGGGGCC GCCGCGCGCA GGCGCAGGCG CACCTGGTCC 
GGTCCCGGCC CGGACGACCG CGACCCGCAG CCGCTCGGCA GGCTCGCGTC CCGGATCGCC
GCCGACCGGG GGTGGGCGGA GAAGCTCAGG GGCGGCCAGG TCATCGCGCA GTGGCCGAAG
CTGGTGGGGG AGGACGTCGC CGAGCACGCG CAGCCGGTGT CGTTCGAGGA CGGCGAGCTG
ACCGTCCAGG CCGACTCGAC GGCGTGGGCG ACGCAGCTGC GACTGCTCCA GCGGGAGCTG
CTGAAGAAGA TCGCGGCCGG GTTGGGCCCG AACGTCGTCA AGCGGCTCAA GGTGCTGGGG
CCCGCCGCGC CAAGCTGGCG CTACGGCCCC AGGCACGTTT CAGGGCGTGG TCCGCGCGAC
ACCTACGGGT GA
 
Protein sequence
MRSRRATGGA AARRRRRTWS GPGPDDRDPQ PLGRLASRIA ADRGWAEKLR GGQVIAQWPK 
LVGEDVAEHA QPVSFEDGEL TVQADSTAWA TQLRLLQREL LKKIAAGLGP NVVKRLKVLG
PAAPSWRYGP RHVSGRGPRD TYG