Gene Amir_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0003 
Symbol 
ID8324145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp3806 
End bp4720 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content72% 
IMG OID644940538 
Product6-phosphogluconate dehydrogenase-like protein 
Protein accessionYP_003097823 
Protein GI256374163 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1023] Predicted 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00463998 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCTCG GAATCGTCGG CCTCGGCAAA ATGGGCTTCA ACATGCGCGA GCGGGTCCGC 
CGCGCTGGTC ACGAGGTCGT CGGCTACGAC CGCAACCCGG ACGTCAGCGA CACCACGTCG 
CTCGCCGACC TCGCGGCCAA GCTGACCGGC CCCAGGGTGG TCTGGGTGAT GGTCCCCGCC 
GGGGAGATCA CCAGGAACAC CGTCGCCGAG CTGAGCGAGG TGCTCAGCGA GGGCGACCTC 
GTCATCGACG GCGGCAACTC GCGGTTCACC GACGACGCCC TCAACGCCGC CAAGCTGGCC 
GAGAAGGGCA TCGGCTACCT CGACTGCGGC GTGTCCGGCG GCGTCTGGGG CCTGGAGAAC 
GGCTACGGCC TGATGGTCGG CGGCGACGCG GCCGACGTCG AGCGCGCCAT GCCGATCTTC 
GACGCGCTGC GCCCCGAGGG GCCGCGCGAG GAGGGCTTCG CGCACGCGGG CAAGCTCGGC 
GCGGGCCACT TCGCCAAGAT GGTGCACAAC GGCATCGAGT ACGGCCTGAT GCAGGCGTAC 
GCCGAGGGCT TCGAGCTCCT GGAGGCCTCG GAGCTGGTCG AGAACGTGCC CGCCACCATC 
AAGGCGTGGC AGCGCGGCAC CGTCGTCCGC TCCTGGCTGC TCGACCTGCT GGTCAACGCC 
CTGGACTCGG ACCCGGAGCT GGACGACCTG CGCGGCTACG TCGAGGACTC CGGCGAGGGC 
CGGTGGACCG TCGAGGAGGC GATCAACCAC GCGGTGCCCG CGCCGGTGAT CTCCGCCGCG 
CTGTTCGCCC GCTTCGCGTC GCGCCAGTCC GACTCGCCCG CCATGCGCGC GGTGGCGGCG 
CTGCGGAACC AGTTCGGCGG GCACGCCGTG CAGTCCGCGG GCCCGTCCTC CGGCTCCGGC 
AGCACGCAGG GCTGA
 
Protein sequence
MQLGIVGLGK MGFNMRERVR RAGHEVVGYD RNPDVSDTTS LADLAAKLTG PRVVWVMVPA 
GEITRNTVAE LSEVLSEGDL VIDGGNSRFT DDALNAAKLA EKGIGYLDCG VSGGVWGLEN 
GYGLMVGGDA ADVERAMPIF DALRPEGPRE EGFAHAGKLG AGHFAKMVHN GIEYGLMQAY 
AEGFELLEAS ELVENVPATI KAWQRGTVVR SWLLDLLVNA LDSDPELDDL RGYVEDSGEG 
RWTVEEAINH AVPAPVISAA LFARFASRQS DSPAMRAVAA LRNQFGGHAV QSAGPSSGSG 
STQG