| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4248 |
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| Symbol | |
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| ID | 4670502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008766 |
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| Strand | + |
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| Start bp | 4 |
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| End bp | 4746 |
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| Gene Length | 4743 bp |
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| Protein Length | 1580 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639826921 |
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| Product | hypothetical protein |
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| Protein accession | YP_974083 |
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| Protein GI | 121582554 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4227] Antirestriction protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00909879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.515927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATCA TCCAGGCCGA GGCGCAGGCC GCCACCCTGG CGTTCACCCG AGACTATCCG
GGCGCGTTGG AGCTGATCTA CCACTTCCGC GAGAGCACCG GCGAGCTGTA CGGCCACCGC
GCAGCGGAAG TTCCGGCAGA CCTCAAGGGC GGCTATCTGT CGAAGGAGCA AATCCACAAC
GGCCGTTCGT ACCGTGGCCG CGTGGACGTG CCCCTTGGGA ACATGGACGA CGCCGCCGAC
CTGCTGGTGA CATTGCGGCA TGAAGTGCTG GGCCACTACG GGGCCAACAC CTTCGCGCCG
GCCGAGAAGC GCGCCCTGCT GGACGGCATC ATCGCCGCCC GCGAACAGCC CGGCATGAAA
GACCGCTGGG AGGACATCAA CCGCCGCTAT GCCGGCACGT CGATGGACGT GCGGGCCGAA
GAGGTATGGG CGCTGCATTG CGAAACCCTC GCGCCCGGCC AGCACGTGGG CCAGGCCCAC
GTGCGCGAGC GCGGCGAGCA GTCATTCATG GAAACCTGCA TCGCCCGCGT GAGGCCCATG
CAATCCGCCG ACCTGCACAA CATCGTGTGC ATGGTCGCCG ATGGCCTTCA CGACCGTTCC
AGGACGCAGC AGACCTTTCC GCAGATCAAC GAACTATTCC GAAGGGATGA AACTATGGAA
CCGAAGAAGC CATTTCATGA AGTCGTTGCC GAAAAACTGA TCGAGCAGCT CAAGGCCGGC
ACCGCACCGT GGCAACGACC GTGGGAGCCT GGCGAGCCGA ACGCCTACTT GCCGATGAAC
CCGACCACCG GCAAGCGGTA CAAGGGCATC AACGCCATTC ACTTGATGGC CCAGGGCCGC
AGTGATGGCC GTTGGATGAC CTACAAGCAG GCCGCCGCCG TGGGCGCGCA GGTACGCAAG
GGCGAGAAGG GCACGCCCGT TCAATACTGG AAATTCAGCG AGGAACAGAA CAAGGTCGAT
GAGAGCGGCC GGCCCGTTCT CAACGCGAAG GGCGAGCCGG TCAAGGAAAC CGTGCAGCTC
GAACGCCCGC GCGTGTTCTT CGCCACGGTG TTCAACGCCG AGCAGATCGA CGGCCTGCCG
CCGATCCAGA AGAAGGAACA GACCTGGAGC GCCGTCGAGC GCGCCGAGCA CATCCTGAAA
GCGTCCGGCG CGTCGATCAC GCACGCGCCT GGTGATCGCG CCTTCTACCG GCCGGCGACC
GACAGCATCC ACCTTCCCGA CCGGGGCCAG TTCCCCAGCG CCGACAACTA CTACGCGACG
GCCCTGCACG AGCTGGGCCA CTGGACGGGC CACGCCTCGC GGCTTGACCG CGACCTGGCG
CACCCGTTCG GGAGCGAGGG TTACGCCAAG GAAGAGCTGC GGGCCGAGAT CGCTTCGATG
ATCTTGGGCG ACGAGCTGGG CATCGGCCAC GATCCGGGCC AACACGCCGC CTATGTCGGT
TCTTGGATCA AGGCGCTGCA AGACGAACCG CTGGAAGTGT TCCGCGCCGC CGCCGACGCC
GAGAAGATTC ACGATTACGT GCTCGCCTTC GAGCAAAAGC AGGTTCAGGA GCAAGACCAG
CAGCAGAGCC AGGCACAGCA GCAGCCGCAC GAATTGACCC TGGCGCAGTT TGCCAGCCAG
GCGACCGCGC AGGAATTGAT GAACCACGGC CGGAAGTGGG AAGTGAGGCA CGGCGACTAT
TCGGCCTTCT CCGATGCCGC CACGGCCGAG GAAGCCATCG CGGACGTGCA TCGCGGCGCG
GTGAATAACG CCCTATACCT CAACACGCCC GAGAGCCGCA GCGCGAACCT GCCGGGCAGC
AGCTTCCCGC CGGCGGCGGT GTTGGCCGAA TACCCCGACC TGGTGGAGAA GTTCCCCGAC
GCGGTGCCCG CGCCCGAGCT GGGCCATCAG CCGGGCGACC AGGTGCAGAC CGTGGCCGAG
CGCACGGCAA GCCAGTACGA GGCTATGAAG GCCGCCGACG AGGCTTTCCA GCGTGAGCTT
GTCCGGGCCT ATGGCGAGGA CAACGCCGGG GACGCCCGCT ACAAGCCTCG CCACGACGAT
GAAGCCGTGC AGAAGGCCGG CGATGCCTTC GTGGCCGCGT CCGACACTTG GCGCGAAGCC
GTGCGGGAGG CCCGCGAAAC CGTTGCAAGT CAGGAGGCCA GCATGCAGAC ACCGGAAGCG
CAGAACGAAG CCGTGGCGAC CGCCCTGGAG GCGGCCGGCT GGCAGCGTGG CGATGGCATC
GCCATCGCGT CCAAGCCCTT CGACACGGTG AACGGCCGCA ATGACGCGCT GGCCTTCATC
ACCGACGGCG ACGGGATCAA CCGCACCTTG CAGTTCCAGT ACACCAGCGA GGGCCGCAAC
GTCACCGGCG CGGACGGCGT GCTGATCCCG GTCGGCGCGA CGGCGGCCCA GGCGGCCGAG
CTGGCGACGA GCGCCGCCGC CAGGGCCGAG AAGTCGATTC AGGATTCCTA TGGCGTCAGG
ATCGCGGCCA TGCAGCAGGC GGGCAAGCAA CAGCAGGACG CCGAGGCGTG GGCCTTGAAG
CACGTCGAGC AAGGCACCAT CGGGCGCTTG CTCGAAAGCG CGAGCCTGGA GCAGATCGAC
CGCGCCCTGG ACGTGCTGGA CAGCATGCAG CCCATGAACA CCCAAAACGA GTTCTGGACG
CGCCACGAAC TGCCCTTCGA CCCCGAACCG CTGCAAGACA AGATCAACGC GGCGATGAAT
GACCTCATCG AGAACCGGCG GCCCGATGCC GTGGTGGCTG CGACCTTCCT TGACCTCAAG
ACCGGCAACA CCAATTCACG CGAGCGCGAC CGCCAGGCAT TCGACACGGC GGCCGACAAC
GCGCTGGGCT TCACCCTGCC CCATGACTGG ACGGGTGAAG TGCGGGTTGT CGGCGTGATC
GAGCGCGACG GCGAATTGCA ATCCGCCGCC GTGGGCGACA CGCCCGAGGC TTACCACCTG
TACGCCCGCA AGGGCGATGC GCAGCCCGGC GAAGATGCGT TTGCCTACCT CACCGCGACC
CGCACGCTCG GCGAGGCCGA CGAGCTGGCC GACCGCCTGG CGCTGATCGA CGCCAACGCC
CAAACCGACC AGTACGAGAA AGCCACCCGC GTTGCCCGCG TGCAAGAGGA TCGCGTTCGC
CGCGATCCGA ACAGCACCGA CGAGGACATT TCAGCCGCTA AAGAGGCGCG CAAGGCGCTG
GAGGCCAGGG CATTCGTTGC GGCCGAGCAA GCCAAGACCA GCCAGCGCGA TGCCGAGCAG
CCCAAGGCCG CGCAGAGGGC CGCAAGTGGC GAACGCCAGT TCATCAACGT GCCGTTCAAG
GAGAAGGACG AGGCCAAGCA GCTCGGAGCG CGCTGGGATC GCAAGGAACA GTCCTGGTAC
GTGCCGGCGG GAGTGGATGC GGCCCCCTTC GCCAAGTGGG CACAGGGAGC CGCTACGGCG
GCCGTGGAGC CTCGCAAGGC CCAAGAGGCT CCGCAAGCCC ATGCCGGCGG CCAGAAGGCC
GCCACGGCCC CGCAGGAGGC CCGCCAGTAC CTCGCCGTGC CATACGAACA GCGCAACGCC
GCCAAGGCCG CCGGTGCGCT TTGGGACAAG GCCGCGAAGT CCTGGTATGC CGGCCCGCGT
GCCGACATGG CGAAGCTGGA GCGGTGGAAG CCCGAGAACG TGCAGGCCCA GCAGGGGCCA
GCGATGACGC CAAGGGAAGA GTTCGCCGAG GCCATGCGCA GCGCCGGCCT GTTCACCGGC
AGCAACGCCC AGGGCGATCA CCCGATCATG GACGGCAAGC GGCATCGCGT GCCGGTCGAG
GGTGGCAAGA AGGGCGCGCT CGATGGCTTC TATGTCGGCC ACCTGGACGG CCACCCGGCC
GGCCGGATCA TCAACAACAA GACCGGCACG GACATTACCT GGAAGAGCAA GGGTTACGCC
TTGAGCGACC AGGAGAAGGC CAAGCTCCAG GCCGAGGCGG CCGAGAAGCT GGCCCAGCGT
GCGGCCGAGC AAGACAAGCT CCAGGAAGCC ACCGCGCAGC GCGTAGGCCG CCAGATGGCC
GACCTGGTGC CGGTCGAGCA GCCGACGCCC TACCTGCAAG CCAAGGGCAT CGAGGCCCAC
GCCGGCGTGT TCACCGACCG CGAGGGCCAG AAAACCTACA TCCCCGCCTT CGACGCGGAC
GGCAAGCAGT GGACGATGCA GTACATCCAG GAGGACGGCA CCAAACGGTT CGCCAAGGAC
AGCAAGAAGG AAGGATGCTT CCACCCGGTT GGCGGCATGG ATGCGCTGGC CGCAGCGCCG
GCGCTGGTGA TCTCCGAGGG CTACGCCACG GCGGCGAGCC TGGCCGAAGG GCTGGGGCAT
GCCACCGTGG CCGCGTTCGA CTCGGGCAAC CTGCCGCACG TGGCCCGCGC CCTGCGCGAG
AAGTTCCCCG ACAAGCCCAT CGTGATCGCC GGCGACGACG ACAAGGCCCA GGAGATCGAG
CGCGGCCACA ACCCCGGCCG CGCCAAGGCC GAGGAAGCCG CGAAGGCCGT AGGCGGCAAG
GCCATCTTCC CGATCTTCGC GCCGGGCGAG CAGCAGGCGA ACCCCAAGGG CTTCACCGAC
TTCAACGACC TGGCGAACAA GAGCGAGCTG GGCCGCGATG GCCTCAAGCG CCAGGTCGGC
GCGGCCGTGG GCCAGGTGCT GATCGAGGAA GGCCGCCGGC AACAGCAGGA GCAGCGCCAG
GAGCGTGCGG AGAAGCAACA GCAGCAGCCG GAACGCCCTC GCCGCGCTGC ACGCATCGGC
TAA
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| Protein sequence | MPIIQAEAQA ATLAFTRDYP GALELIYHFR ESTGELYGHR AAEVPADLKG GYLSKEQIHN
GRSYRGRVDV PLGNMDDAAD LLVTLRHEVL GHYGANTFAP AEKRALLDGI IAAREQPGMK
DRWEDINRRY AGTSMDVRAE EVWALHCETL APGQHVGQAH VRERGEQSFM ETCIARVRPM
QSADLHNIVC MVADGLHDRS RTQQTFPQIN ELFRRDETME PKKPFHEVVA EKLIEQLKAG
TAPWQRPWEP GEPNAYLPMN PTTGKRYKGI NAIHLMAQGR SDGRWMTYKQ AAAVGAQVRK
GEKGTPVQYW KFSEEQNKVD ESGRPVLNAK GEPVKETVQL ERPRVFFATV FNAEQIDGLP
PIQKKEQTWS AVERAEHILK ASGASITHAP GDRAFYRPAT DSIHLPDRGQ FPSADNYYAT
ALHELGHWTG HASRLDRDLA HPFGSEGYAK EELRAEIASM ILGDELGIGH DPGQHAAYVG
SWIKALQDEP LEVFRAAADA EKIHDYVLAF EQKQVQEQDQ QQSQAQQQPH ELTLAQFASQ
ATAQELMNHG RKWEVRHGDY SAFSDAATAE EAIADVHRGA VNNALYLNTP ESRSANLPGS
SFPPAAVLAE YPDLVEKFPD AVPAPELGHQ PGDQVQTVAE RTASQYEAMK AADEAFQREL
VRAYGEDNAG DARYKPRHDD EAVQKAGDAF VAASDTWREA VREARETVAS QEASMQTPEA
QNEAVATALE AAGWQRGDGI AIASKPFDTV NGRNDALAFI TDGDGINRTL QFQYTSEGRN
VTGADGVLIP VGATAAQAAE LATSAAARAE KSIQDSYGVR IAAMQQAGKQ QQDAEAWALK
HVEQGTIGRL LESASLEQID RALDVLDSMQ PMNTQNEFWT RHELPFDPEP LQDKINAAMN
DLIENRRPDA VVAATFLDLK TGNTNSRERD RQAFDTAADN ALGFTLPHDW TGEVRVVGVI
ERDGELQSAA VGDTPEAYHL YARKGDAQPG EDAFAYLTAT RTLGEADELA DRLALIDANA
QTDQYEKATR VARVQEDRVR RDPNSTDEDI SAAKEARKAL EARAFVAAEQ AKTSQRDAEQ
PKAAQRAASG ERQFINVPFK EKDEAKQLGA RWDRKEQSWY VPAGVDAAPF AKWAQGAATA
AVEPRKAQEA PQAHAGGQKA ATAPQEARQY LAVPYEQRNA AKAAGALWDK AAKSWYAGPR
ADMAKLERWK PENVQAQQGP AMTPREEFAE AMRSAGLFTG SNAQGDHPIM DGKRHRVPVE
GGKKGALDGF YVGHLDGHPA GRIINNKTGT DITWKSKGYA LSDQEKAKLQ AEAAEKLAQR
AAEQDKLQEA TAQRVGRQMA DLVPVEQPTP YLQAKGIEAH AGVFTDREGQ KTYIPAFDAD
GKQWTMQYIQ EDGTKRFAKD SKKEGCFHPV GGMDALAAAP ALVISEGYAT AASLAEGLGH
ATVAAFDSGN LPHVARALRE KFPDKPIVIA GDDDKAQEIE RGHNPGRAKA EEAAKAVGGK
AIFPIFAPGE QQANPKGFTD FNDLANKSEL GRDGLKRQVG AAVGQVLIEE GRRQQQEQRQ
ERAEKQQQQP ERPRRAARIG
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