| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4187 |
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| Symbol | |
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| ID | 4670348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008765 |
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| Strand | - |
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| Start bp | 21549 |
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| End bp | 22049 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639826861 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_974023 |
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| Protein GI | 121582491 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000629 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000117899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTACTTCT CTGCACGCGC ACTGATCGCG GCGGCATCGC TGATGCTGCC GCTCGCTGCT
TCTGCAACGT GCTGGGATGA GGCTGGGCGC GGCTACGGGA TCGACCCCTT GCTGTTGAAG
GCGATTGCCT GGAAGGAATC GCGCGGCTGG ACGGGTGCAG TCGGCCCGAA GCTGAAAGAC
GGCAACCGCG CGCTGGGCCT CATGCAGATC AACACGATCC ACCTGCCGAA CCTCGCGCGC
TTCGGCATCC GCCGTGAACA CCTGTTCGAC GCTTGCACCT CGCAGAAGGT GGGGGCCTGG
GTTCTGGCCG ACTGCATCCA GCGTTTCGGC GCTACCTGGA AGTCCGTGGG CTGCTACTAC
GCCGGTCCGG CATCGACCAA TGTGAGCGCC CAGGTTGAGT ACGTCCGCGA CGTGCAGCGG
TTCTACGAGG GCTACCGCAG ACAGCAAGCC CACCAAATTT CAACTTCACC GGCCCAAGTG
GCCAGTTTCC AAGGGGATTG A
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| Protein sequence | MYFSARALIA AASLMLPLAA SATCWDEAGR GYGIDPLLLK AIAWKESRGW TGAVGPKLKD
GNRALGLMQI NTIHLPNLAR FGIRREHLFD ACTSQKVGAW VLADCIQRFG ATWKSVGCYY
AGPASTNVSA QVEYVRDVQR FYEGYRRQQA HQISTSPAQV ASFQGD
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