| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4113 |
|---|
| Symbol | |
|---|
| ID | 4673420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 4394695 |
|---|
| End bp | 4395858 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639841151 |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_988290 |
|---|
| Protein GI | 121596394 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3178] Predicted phosphotransferase related to Ser/Thr protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.567269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACC CCTCTTCCCC CACTCCGGCG GGCACATCCG AGCCGGCCAC GGGCGCCGTG
CACACGGGCG CCGTGCATAC GGGCGCCGTG CATGCGAGCG CCGTGCATTG GACCGACCCG
GCCCGCCAGG CAGCCTTCAA CGCCTGGCTG GCCCCGCTGG CCGCCTCGCT CCAGTTGCGG
CCCGAGTCCC TGCGCCCGGC GTCCGCGGAC GCGAGCTTTC GCCGCTACCT GCGCCTGGAC
GCCATTGATG GCACCAGCCG CATCGTCATG GACGCGCCGC CCGACAAGGA AGACTGCCGC
CCGTTCGTGC AGGTGCAGGC GCTGCTGCAG GCCGCCGGCC TGCGCGTGCC GCAGATCCTG
GCCTGGGACG AGGCGCACGG CTTCATGCTG CTGTCCGACC TGGGCGCGCA GACGGCCATC
GAACGCCTGG ACCCCGCCAA CCCGGCCGCC GCGCACGCCT GGTACCTGCA GGCCGTGGAC
CTGCTCATCG ACTGGCAGCG CGCCTCGCGC CCCGGTGTGC TGCCGGCCTA CGACGAGCCG
CTGCTGCGCC GCGAGCTGCA GCTCTTTCCC GACTGGTACA TCGCCCGCCA CCGCCAGGCC
ACGCTGACCG ATGCGCAGCA GACCACGCTG GCCCGCGCCT TCGACGCCAT CGTGGCGCAG
AACCTGGCGG CCCCCAGCGT GTACGTGCAC CGCGACTTCA TGATGCGCAA CCTGATGGTG
GGTGCGGACG AGCGCCTGGG CGTGCTGGAC TTCCAGGACG CGGTCTACGG CCCCGTGACC
TATGACATCG CCAGCCTGAT GCGCGACGCC TTCATCAGCT GGGAAGAAGA CTTCGTCATC
GACATTACCG TGCGTTACTG GGAGAAGGCC CGGCGTGCGG GCATTCTCGG CGCCGCGAGC
GGCAGCGGCT GGGGTGCGGA CTTCGGCGAC TTCTACCGCG CGGTGGACTT CATGGCGCTG
CAGCGCCACC TGAAGGTGGC CGGCATCTTC GCGCGCCTGA CGCTGCGCGA CGGCAAGCCC
AAGTACCTGG CCGACGCGCC GCGCTTTATC GCCTACATCC GCCAGACGGC CGGCCGCTAC
CGCGAGCTGT CGCCGCTGCT GCGGCTGGTG GACGAACTGG AAGGCACTCA GGCCGCCATG
GGCTACGCCT TCGGGCGCGT CTAG
|
|---|
| Protein sequence | MSHPSSPTPA GTSEPATGAV HTGAVHTGAV HASAVHWTDP ARQAAFNAWL APLAASLQLR
PESLRPASAD ASFRRYLRLD AIDGTSRIVM DAPPDKEDCR PFVQVQALLQ AAGLRVPQIL
AWDEAHGFML LSDLGAQTAI ERLDPANPAA AHAWYLQAVD LLIDWQRASR PGVLPAYDEP
LLRRELQLFP DWYIARHRQA TLTDAQQTTL ARAFDAIVAQ NLAAPSVYVH RDFMMRNLMV
GADERLGVLD FQDAVYGPVT YDIASLMRDA FISWEEDFVI DITVRYWEKA RRAGILGAAS
GSGWGADFGD FYRAVDFMAL QRHLKVAGIF ARLTLRDGKP KYLADAPRFI AYIRQTAGRY
RELSPLLRLV DELEGTQAAM GYAFGRV
|
|---|
| |