Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_4110 |
Symbol | ksgA |
ID | 4673527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 4389936 |
End bp | 4390697 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639841148 |
Product | dimethyladenosine transferase |
Protein accession | YP_988287 |
Protein GI | 121596391 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACA TCCCGCGCAA GCGCTTCGGT CAGCACTTCC TGAGCGACCA GGGCATCATC GATGCGATCG TGCGCGCCAT CGCGCCCGAG CCCGGGCAGC CCATGGTGGA GATCGGCCCG GGGCTGGCGG CGCTGACCCA GCCGCTGGTT GAACGCCTGG GCCGGCTCAC GGTGGTCGAA CTGGACCGCG ACCTGGCCGC GCGGCTGCGT CAGCACGGGC AGCTCGATGT CATCGAGTCC GATGTGCTGA AAGTAGACTT TGCGCAGGTA GCGCAAGCGC TGAATGCTTC CAAAATAAGA GTAGTCGGCA ACCTCCCCTA CAACATCTCC ACGCCCATCC TGTTCCATCT GCTGGCGCAC GTGCGGGTCA TTGCGGACCA GCATTTCATG CTGCAAAAGG AAGTCATCGA CCGCATGGTG GCCGCGCCGG CGACCAGCGC CTATGGCCGG CTGTCGGTGA TGCTGCAATG GCGCTACGCC ATGGAGAACG TGCTGTTCGT GCCGCCCGAG AGCTTCGACC CGCCGCCGCG CGTGGACAGT GCGGTGGTGC GCATGGTGCC GCACGAAGCG CCCGAGGCGC TGTCGATGCC CGTGCTGGAG GAGTTGGTGC AGGTGGCCTT CAGCCAGCGG CGCAAGCTGT TGCGCCACAC GCTGGGCCGC TGGCTCGAAG CGCGGCAGTT TGCCGGCACG TTCGACACCC AGCGCCGGGC CGAGGAGGTG CCGGTGAGCG AGTACGTCGC ATTGGCGCAG GAGTGCTCCT GA
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Protein sequence | MKHIPRKRFG QHFLSDQGII DAIVRAIAPE PGQPMVEIGP GLAALTQPLV ERLGRLTVVE LDRDLAARLR QHGQLDVIES DVLKVDFAQV AQALNASKIR VVGNLPYNIS TPILFHLLAH VRVIADQHFM LQKEVIDRMV AAPATSAYGR LSVMLQWRYA MENVLFVPPE SFDPPPRVDS AVVRMVPHEA PEALSMPVLE ELVQVAFSQR RKLLRHTLGR WLEARQFAGT FDTQRRAEEV PVSEYVALAQ ECS
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