| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4068 |
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| Symbol | mnmA |
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| ID | 4673811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 4338080 |
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| End bp | 4339219 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639841109 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_988248 |
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| Protein GI | 121596352 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC ACCGGGTCGT GGTGGGCCTG TCGGGGGGCG TGGACTCCGC CGTCACAGCG
CACCTTCTCA AGCAGCAGGG CCACGAGGTG GTCGGCATCT TCATGAAGAA CTGGGAAGAT
GACGACGACA GCGAGTTCTG CTCCAGCCGC CAGGACTTCC TGGACGCGGC CAGCGTGGCC
GACGTGATCG GCATCGAGAT CGAGCACGTC AACTTTGCCG CCGAGTACAA GGACCGGGTG
TTCGCCGAGT TCCTGCGCGA ATACCAGGCC GGCCGCACGC CCAACCCGGA CGTGCTGTGC
AACGCCGAGA TCAAGTTCAA GGCCTTCCTG GACCACGCCA TGCGCCTGGG CGCCGAGAAG
ATCGCCACCG GCCACTACGC GCGCGTGCGG CAGAACCCGG CCACGGGCCT GTTTGAGCTG
CTCAAGGGAT TGGACCCGTC CAAGGACCAG AGCTACTTTC TGCACCGCCT GAACCAGGCG
CAGCTGTCCA AGACGCTGTT CCCCGTGGGC GAGCTGCACA AGACCGAGGT GCGCCGCATC
GCTGCCGACA TCGGCCTGCC CAACGCCAAG AAGAAGGATT CCACCGGCAT CTGCTTCATC
GGCGAGCGGC CGTTCCGCGA GTTCCTCAAC CGCTACATCC AGCATGCGCC CGGCCCCATC
CTGGACGACC GCGGGCGCAA GCTGGGCCGC CACGTGGGCC TGTCGTTCTA CACGCTGGGC
CAGCGGCAGG GCTTGGGGAT CGGCGGTGTC AAGGAAAAAG GCGCCGGGGC GAAAGCACCG
TCTGGCCAGC CGGTGCGCGG CGCGGGCGAC CATGCGCCCT GGTTCGTGGC CCGCAAGGAG
CTGGAGACGA ACACCCTGCG CGTGGTGCAG GGCCACGAGC ACCCGTGGCT GCTGTCGCAC
CGCCTGGACG CGCAGGACGC GAGCTGGATT GCCGGCCATC CGCCCGCAGC AGGCGCCTGC
GCTGCCAAGA CGCGCTACCG CCAGCAGGAC GCCGCCTGCA CGGTGCTGGC CGCACAGGGC
GACGCCTTCA ACCTGCAGTT CCCTGAGGCG CAGTGGGCCG TGACGCCGGG CCAGTCGGCC
GTGCTGTACG ACGGTGAGGT GTGCCTGGGC GGTGGGGTGA TTGCGGCCGT GAACGGCTGA
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| Protein sequence | MKKHRVVVGL SGGVDSAVTA HLLKQQGHEV VGIFMKNWED DDDSEFCSSR QDFLDAASVA
DVIGIEIEHV NFAAEYKDRV FAEFLREYQA GRTPNPDVLC NAEIKFKAFL DHAMRLGAEK
IATGHYARVR QNPATGLFEL LKGLDPSKDQ SYFLHRLNQA QLSKTLFPVG ELHKTEVRRI
AADIGLPNAK KKDSTGICFI GERPFREFLN RYIQHAPGPI LDDRGRKLGR HVGLSFYTLG
QRQGLGIGGV KEKGAGAKAP SGQPVRGAGD HAPWFVARKE LETNTLRVVQ GHEHPWLLSH
RLDAQDASWI AGHPPAAGAC AAKTRYRQQD AACTVLAAQG DAFNLQFPEA QWAVTPGQSA
VLYDGEVCLG GGVIAAVNG
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