Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_4051 |
Symbol | |
ID | 4673118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4317822 |
End bp | 4318334 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639841092 |
Product | peptide deformylase |
Protein accession | YP_988231 |
Protein GI | 121596335 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.586324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTC TTCCGATTCT CTGTTACCCC GATCCTCGCC TGCACAAGGT CGCCCAGCCC GTGACGGCGG TGGATGAGCG CGTGCGCGCC ATCGTGGACG ATATGTTCGC CACCATGTAC GACGCCCATG GCATCGGCCT GGCCGCCACG CAGGTCGATG TGCACGAGCG CATCGTGGTG ATCGACGTTT CCGAAGAGCG CGACACGCCG CTGGTGCTGA TCAACCCCGA GATCACCTGG GCCAGTGCCG AGAAACAGGT GGGCGACGAG GGCTGCCTGT CGGTGCCTGG CATCTACGAT GGCGTGGAGC GCTCCACTGC CGTGCACGTG CGCGCGCTGG ACCGCGACGG CCAGCCGCGC GTGATCGAGG CCGAGGGCCT GCTGGCCGTG TGCATCCAGC ACGAGATGGA CCACCTGCTG GGCAAGGTGT TCGTGGAATA CCTGTCGCCC TTGAAGCGCA ACCGCATCAA GACCAAGCTG TTGAAGCAGC AAAAGCAGGC CGAACGCGCA TGA
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Protein sequence | MAILPILCYP DPRLHKVAQP VTAVDERVRA IVDDMFATMY DAHGIGLAAT QVDVHERIVV IDVSEERDTP LVLINPEITW ASAEKQVGDE GCLSVPGIYD GVERSTAVHV RALDRDGQPR VIEAEGLLAV CIQHEMDHLL GKVFVEYLSP LKRNRIKTKL LKQQKQAERA
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