| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4016 |
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| Symbol | |
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| ID | 4672564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 4275857 |
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| End bp | 4278007 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639841056 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_988196 |
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| Protein GI | 121596300 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGCA CCGTGGAGCA CGGCGGACCG GCGGGCGGAC GGGACAGGGG TGCTGCGGGC
CCGCAGCAGG GCCCGCAGTC GCTGCTGCCC CCTTCGGCGC CCCAAGACGG GCCCCAGGAC
AAGGTACCCC GCCGGTGGCG CCGCTGGGTG GGTGCGTGGC GGCGCTGGTC CCTGTGGACG
CTGCTGGTGG CTCTGGTGGC GGGCATGCTG GTCACCCAGG TATGGCTGGC TGGCCGCTAC
GAGGCCAGCC AGGTGCAAAG CCGCCTGGAA CGCGACACTG CCGACGCCGT GGCCGACATC
CGCAACGCCT TCGCGCACAA CCTGCAGAAC CTGCAGGCGC TGCAGGCGGG CGACCCCGAC
CTGGCCGCGT GGGAGGCGCG CGCGGCCGAG CTGCTGAGCA CGCGCCGCGA GCTGGTGCGC
ATCGAATGGC GGGACACGCA GCTGCTGCTG CGCGCACATG CAGAGTCGCC CTATCGCCCC
CTGCCGTGGG ACGCCACCAC GCGCAGCGGC ACGCATTCGG AGACCATGCT GGCCTGTACC
AACGCCCGGC GCATCACCGG CCCGTCGTAC TCCAGCAGCT ATTTCCAGCC CCTGCCCGAC
GGCATGGGCG CCGAGATGAT GGAGGTCTGC CTGCCGTTGA TCCAGGACGG ACGCGTGCGC
GGCTTCCTGG TGGCCACCTA CGCGCTGCAG ACCGTGCTGC AGGATTTGGT GGCGCCCAGC
CTGCAGCGCA CCCAGGAGGT GTCGTTCACC GAGGCCGACG GCACGCGGCT GGCGCTGGTG
GGCGCGCTGC GCCGGGGCTC GCGCATGTTC ACGGCGCAGC AGCTGTTCGA CCTGCCGGGC
AACACCCTGG TGCTGCGCAT GGACGGCTGG CACGCCGCGC CCAGCGTGTT TCCCAACGTC
CTCACGGCCC TGGTCACGGC CATGTCGATC GCGCTGGTGT CGGTGCTGGT GGTGCTGGTG
CGCGACAACC GGCGCCGCCT GCGCGCCGAG CGCGACCTGG GCGACGCGCT GGCTTTTCGC
AAGGCGATGG AGGACTCGCT GGTCACGGGG CTGCGTGCGC GCGACCTCAA CGGCCGCATC
ACCTATGTGA ACCCGGCGTT CTGCGACATG GTGGGCTTTC CCGCATCCGA GCTGGTGGGC
CAGACGTCGC CGCTGCCCTA CTGGCCGCCC GAGCATGCGC AGGAATATGC GGAGCGGCAG
GTGGTGCGCA TGTCGGGCCG GCTCGACCCG CCGCGCGAAG GGTACGAATC CACCTTCATG
CGCAGGGACG GAACGCGCTT TCCCGTCATG ATCTACGAAG CGCCGTTGAT CAACGCACAG
GGCCTGCACA CGGGGTGGAT GGGCTCGTTT CTCGACGTGA GCGAGCAGCG GCGCGTGGAG
GAGCTGTCGC GCACCTCGCA GGAGCGCCTG CAGGCCACGG CACTCCTGGC CACCGTGGGG
GAGATGGCAT CGCTGCTGAG CCATGAACTG AACCAGCCGC TGGCGGCCAT CTCCAGCTAT
GCCAACGGCT CGCTGAACCT GCTGGAGCCG GCGCCGGGCG CCGAGTTGCC GTCGCCCCAG
GACCTGCAGG ACGTGCGCGT GGGCGTGCAG CGCATTGCAG CGCAGGCCGA GCGCGCGGGC
CGCGTGATCA AGAGCGTGCA CGACTTCGTG CGGCGCCGCG ACCAGACCCG CGAGCCGGTC
ACCGCGCAGG ACCTGTTCGA TGCGGTGCTG CCCATCATCC GGCTGCAGGC GCGCAAGCTG
GGCGTGCGCG TGGTGCTGTC GATCGAGGAC GGCCTGCCGC CCGCGCTGTG CGACCGCACC
ATGGTCGAGC AGGTGCTGTT GAACCTCACG CGCAACGCCA TGCAGTCCAT GGACGACCCG
CAGATCCATC CGCGCATCCT CGACCTGCGG GTGCGGCGCG CGGCCTCCAA TGCGTCCAAC
AGCTGGCTGG AGTTCTCGGT GGCCGACATG GGCATGGGCA TTCCCGAGGA CGTGGCCGAG
CGCCTGTTCA CGCCGTTCTA CACCACGCGC GTCGAGGGCA TGGGCCTGGG GCTGAGCCTG
TGCCGCACCG TGGTGGAGCA GCATGGGGGC TTTCTGGACC ATGCGGCGCG TGAGCCGCGT
GGTACGGTAT TCACTTTCAC CCTGCCCGCA TTTCAGAAAG CCGACCCCTG A
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| Protein sequence | MGGTVEHGGP AGGRDRGAAG PQQGPQSLLP PSAPQDGPQD KVPRRWRRWV GAWRRWSLWT
LLVALVAGML VTQVWLAGRY EASQVQSRLE RDTADAVADI RNAFAHNLQN LQALQAGDPD
LAAWEARAAE LLSTRRELVR IEWRDTQLLL RAHAESPYRP LPWDATTRSG THSETMLACT
NARRITGPSY SSSYFQPLPD GMGAEMMEVC LPLIQDGRVR GFLVATYALQ TVLQDLVAPS
LQRTQEVSFT EADGTRLALV GALRRGSRMF TAQQLFDLPG NTLVLRMDGW HAAPSVFPNV
LTALVTAMSI ALVSVLVVLV RDNRRRLRAE RDLGDALAFR KAMEDSLVTG LRARDLNGRI
TYVNPAFCDM VGFPASELVG QTSPLPYWPP EHAQEYAERQ VVRMSGRLDP PREGYESTFM
RRDGTRFPVM IYEAPLINAQ GLHTGWMGSF LDVSEQRRVE ELSRTSQERL QATALLATVG
EMASLLSHEL NQPLAAISSY ANGSLNLLEP APGAELPSPQ DLQDVRVGVQ RIAAQAERAG
RVIKSVHDFV RRRDQTREPV TAQDLFDAVL PIIRLQARKL GVRVVLSIED GLPPALCDRT
MVEQVLLNLT RNAMQSMDDP QIHPRILDLR VRRAASNASN SWLEFSVADM GMGIPEDVAE
RLFTPFYTTR VEGMGLGLSL CRTVVEQHGG FLDHAAREPR GTVFTFTLPA FQKADP
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