Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_4001 |
Symbol | |
ID | 4671231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4255218 |
End bp | 4256339 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639841041 |
Product | recA protein |
Protein accession | YP_988181 |
Protein GI | 121596285 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | [TIGR02012] protein RecA |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.627229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.688491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCCA CCGTCAAAGG CAACGCAACC GCCGTCAACA GCGAAAAGGC CAAGGCCCTG CAAGCCGCCC TCGCGCAGAT CGAAAAGCAG TTCGGCAAGG GCACCATCAT GCGCCTGGGC GAGGGCGAGG CCATTGAGGA CATCCAGGTG GTCTCCACCG GCTCGCTGGG CCTGGACATC GCCCTGGGCG TGGGCGGCCT GCCGCGCGGC CGCGTGATCG AGATCTACGG ACCGGAAAGC TCGGGCAAGA CCACGCTCAC GCTGCAGGTC ATCGCCGAGA TGCAGAAGCA AGGCGGCCAG TGCGCTTTCG TGGATGCCGA GCATGCGCTG GATGTGCAGT ACGCCAGCAA GCTCGGCGTT CAGCTCACCG ACCTGCTCAT CAGCCAGCCG GACACGGGCG AGCAGGCGCT GGAGATCGTG GACAGCCTGG TGCGCTCGGG TGCCGTGGAC CTGATCGTGG TGGACTCGGT CGCCGCCCTC ACGCCCAAGG CCGAAATCGA GGGCGAGATG GGCGACGCCC TGCCCGGCCT GCAGGCACGC CTGATGAGCC AGGCGCTGCG CAAGCTCACC GCCACCATCA AGAAGACCAA CTGCATGGTC ATCTTCATCA ACCAGATCCG CATGAAGATC GGCGTGATGT TCGGCAGCCC CGAGACCACC ACCGGCGGCA ACGCGCTGAA GTTCTACGCC TCGGTGCGCC TGGACATCCG CCGTACCGGC ACCATCAAGA AGGGCGACGA GGCGATCGGC AACGAGACCA AGGTGAAGGT GGTGAAGAAC AAGGTCTCGC CCCCGTTCAA GACGGCCGAA TTCGACATCC TGTTCGGCGA GGGCATCTCG CGCGAGGGCG AGATCATCGA CATGGGCGTG AACGCGCGCA TCCTGGAAAA GAGTGGCGCC TGGTATGCCT ACAACGGCGA AAAGATCGGC CAGGGCCGCG ACAACGCCCG CGAGTTCCTG CGCGAGAACC CTGGCCTGGC CGTGGAGATC GAGAACAAGG TGCGCGAAAG CCTGGGCATC GCACTGCTGC CCACGGGCCA CGCGAGCCCG GCGGCCGATC TGCCCGAAGA CAAGCCTGCG CGCGGCAAGA AGGCCGACAA GACGGGCGAG ATCGAGGCGT AA
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Protein sequence | MDATVKGNAT AVNSEKAKAL QAALAQIEKQ FGKGTIMRLG EGEAIEDIQV VSTGSLGLDI ALGVGGLPRG RVIEIYGPES SGKTTLTLQV IAEMQKQGGQ CAFVDAEHAL DVQYASKLGV QLTDLLISQP DTGEQALEIV DSLVRSGAVD LIVVDSVAAL TPKAEIEGEM GDALPGLQAR LMSQALRKLT ATIKKTNCMV IFINQIRMKI GVMFGSPETT TGGNALKFYA SVRLDIRRTG TIKKGDEAIG NETKVKVVKN KVSPPFKTAE FDILFGEGIS REGEIIDMGV NARILEKSGA WYAYNGEKIG QGRDNAREFL RENPGLAVEI ENKVRESLGI ALLPTGHASP AADLPEDKPA RGKKADKTGE IEA
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