Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3996 |
Symbol | |
ID | 4671116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 4250242 |
End bp | 4251207 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639841036 |
Product | hypothetical protein |
Protein accession | YP_988176 |
Protein GI | 121596280 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.96574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.364357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGTC GCAAACTGAT TGCCGCGCTG GCGGTTACCT CTGTAGTTTC TGGAATGACC TTCGCCCAGG ACAACAGCCG TCCCCTGCGC ATCGTCGTGC CCTTCCCGCC GGGCGGCGCT ACCGACATTG CCGGCCGCTC GCTGCAGGAA CCCCTGCAGC GCTTGCTGGG CCAGCCGGTG GTGATCGAGA ACAAGGCCGG CGCGGGCGGC TCCATCGGCA TGGCCGAGGT GGCGCGCGCC ACCGACGGGC TGACCTTCGG CGTGGCCACG TTGTCCACCC ACGGCGTGAA CCCGGCCGTG CTGGGCAAGC TGCCCTACGA CCCCATCAAG GACTTCGTCG GCGTGACCGA GATCGTCAAG GCGCCCGGCA TCATCGTGGT CAACCCCAAG GTGCTGCCCG TCAAGGACTT CGCCGACCTC GTGAAGCACC TGAAGGCCCA TCCCGGCAAG GTGGAATACG CCACGCCGGG CAACGGCACC ATCGGCCACA TGTGGGGCGA GCTGTTCAAG AGCGCCACGG GCACCAGCAT GGTGCACATC CCCTACCGCG GTGCGGGTCC GGCCACCAAC GACGTGCTGG GCGGCCAGGT GCCGGTGTAC TTCGACCAGG TGGCCTCGTC GCTGCCGCAC GTGAAGGCCG GCAAGCTCAA GGCCCTGGCC GTGTCCTGGC ACGAACGCCT GGCCGTGCTG CCCGACGTGC CCACCTATGC CGAGCTGGGC TACAAGCAGG CCAACGATGC GTCGTGGTTC GGCCTGGTGG CGCCCAAATC CACCCCCGCG GCCCAGGTGC AGCGCGTGCA ACAGGCCGTG GCCCAGGCCC TCAAGGAGCC GGCGGTGCGC GATCGCCTGG CGGCCCAGGG GCTGTATGCG TCGGGCACCA CGCCCGCCGA GTTCTCCGCG CAGATCGCGC GTGAAATTGA CAAGATGAAA CAGGTGGCAG CCTATGCCAA GATCAAACTG GATTGA
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Protein sequence | MQRRKLIAAL AVTSVVSGMT FAQDNSRPLR IVVPFPPGGA TDIAGRSLQE PLQRLLGQPV VIENKAGAGG SIGMAEVARA TDGLTFGVAT LSTHGVNPAV LGKLPYDPIK DFVGVTEIVK APGIIVVNPK VLPVKDFADL VKHLKAHPGK VEYATPGNGT IGHMWGELFK SATGTSMVHI PYRGAGPATN DVLGGQVPVY FDQVASSLPH VKAGKLKALA VSWHERLAVL PDVPTYAELG YKQANDASWF GLVAPKSTPA AQVQRVQQAV AQALKEPAVR DRLAAQGLYA SGTTPAEFSA QIAREIDKMK QVAAYAKIKL D
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