Gene Ajs_3875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3875 
Symbol 
ID4673093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4115598 
End bp4116206 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content69% 
IMG OID639840908 
Producthypothetical protein 
Protein accessionYP_988058 
Protein GI121596162 
COG category[S] Function unknown 
COG ID[COG4298] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.772019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTATCGC ATGGCGATAC TTTTCGCCGC TGGATAGGTT ACTGCGTCGG AATATCGGCT 
GCTTTGGCGC CGCGCGGCCG CAGCATCCGC CCCGTGTTCA ACCAACGCCT GCGGGCACCG
ACCACCATGC ATTCCTCTAC CCCCACCCTC CAGCGCGACA CGCGGGCCTG GCAGTTCCAG
GTGTGGGCTT CGTTCGGCAT CGCCGTGTTC CTGTGCGCCA CCGGCCTGGC CTGGCTGCCG
GGCGAGCGGC TGGAGGTGGC CTTCATGTTC ATGGGCTACG TGTTCTGCCT GTCTGCGGCC
TTCATGCTGG CCAAGTTCGT GCGCGACAAC CAGGGCGCGC GCCGCGGCGC CGGCCAGGGC
GGTGGCGACA CCCCGCTGTG GAAGCTCGTC GTCTGGGGCG GCTTTGCCGT GGCCATGGGG
CTCACCGGCT GGGGGCTGTG GGGCATGGCG ATCAGCGCCA CCTACAAGGC CTTTTTGGGC
GTGAGCTGGC TGTACCTCAT CACCTGCGCG TTCACGCTGG CCAAGATGCT GCGCGACCGC
CACGAGGCGG ATCTGGCCGA CGCCCGCCTG CGCAGCCGCC TGCAGGCCCG CACCGAGGCC
GCTGAATGA
 
Protein sequence
MVSHGDTFRR WIGYCVGISA ALAPRGRSIR PVFNQRLRAP TTMHSSTPTL QRDTRAWQFQ 
VWASFGIAVF LCATGLAWLP GERLEVAFMF MGYVFCLSAA FMLAKFVRDN QGARRGAGQG
GGDTPLWKLV VWGGFAVAMG LTGWGLWGMA ISATYKAFLG VSWLYLITCA FTLAKMLRDR
HEADLADARL RSRLQARTEA AE