Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3821 |
Symbol | |
ID | 4670834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4056009 |
End bp | 4057601 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639840854 |
Product | GTP-binding signal recognition particle |
Protein accession | YP_988004 |
Protein GI | 121596108 |
COG category | [N] Cell motility |
COG ID | [COG1419] Flagellar GTP-binding protein |
TIGRFAM ID | [TIGR03499] flagellar biosynthetic protein FlhF |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.236698 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCA AACGCTTTAC CGCTCCCACC GCACGGGAGG CCCTGGCCAA GGCGCGCATG GCCTTCGGTG AAGGCACGCT GATCCTGTCC AACCGCCCCA CGGCGGGCGG CGTCGAGGTG GTGGCCACGG CCGAGGACGC GCTGTCGTCC CTGCACGGCG GTGCCGAGCC GGCACCCAAC CGTCTGCAGG AGCGCGCCGA CGACCTGGCC GCGAGCCAGC CGGTGCGCAT GTCCCAGACG CAGCCCCATG CAGCCCCTGT CCCGCAGCCC GCACGCCAGC CGGCGCCCGC GGCACGCAGC ACCGTGGCGC ACGACACCGA GCAACTGGCC ATGAGCACGC TGTCGTTCCA GGACTATGTG CGCGAGCGCA TGCTGCGCCG CCGCCACGAG GCCTTGCACG GCACGAGCGC CCCCGCGCCC CTGAACGAGC GCGCCGCGCT GGAGCGCGGC CTGCCCGAAC AACGCTTCGA ACCCCGCGCC GAGCGCCTGC CCGAGCCACC CGCGCCACAG CCCGTGAATG CCCCGGTGGC ACGCCACAAC CCATTGCGGC CCATGCATGC CGCCCTGGGC GCAGAGCAGC TCACGCCGCG CCGCGCCGAG GCGCCCGCCA CAGCCGCGCC CACGCTGGCG GCCGGCCTGG GACAGCAGAA CCTCATGAAG GAACTGCAGT CCATGAAGGA GCTGATCGAG GACCGTTTCA ACACCCTGGC CTGGCTGGGC CAGGCCCGCC AGAACCCGAT CCAGTCCACA CTGATGCTCA AGCTCATCCG TGCGGGCTAT TCGCCCGCCC TCTCGCGCGC GGTGCTGGAA CACCTGCCCG AGCATCTGGG CGCCCAGGAC GCCGTGCGCT GGCTCATGGA AGTGCTGGAG CGCAACCTGC GCACCGACGC GCAGACGCTG CCGCTGTACG AGGAAGGCGG CATCTTCGCC ATGGTGGGCG CCACCGGCGT GGGCAAGACC ACCACCACCG CCAAGCTGGC CGCCTTGTGC GCGCGCATCC ACGGCCCCGC CAGCGTGGGC CTGATCACGC TGGACACCTA CCGCGTGGGC GCGCACGAGC AGTTGCGCTC CTACGGCCGC ATGCTGGGCG TGGTGGCGCA CCTGGCGCAC GACCGCGCGG CGCTGCAGGA CCTGCTGGGC CTGCTGTCGT CCAAGAAGAT GGTGCTCATC GACACCACGG GCGTGGCCCC GCGCGACCCG CGCAAGCGCG ACCTGCTGGA CGTGCTGGCG CTGCCCGGTG TCAAGCGCCT GCTGGTGCTC AACGCCAGCA GCCACGGCGA TACGCTGGAC GACGTGCTCA CCGGCTTCAA GACCACCGGC TCGCAGCAGG CCATCCTGTC CAAGGTAGAC GAGGCCGTGA AGCTGGGCCC CGCCATCGAT GCGCTGATCC GCCACCAGAT GGTGCTGCGC GGCGTGACCA ACGGCCAGCG CGTGCCAGAG GACTGGGAAG CGGCCGACGC CCGCAAGCTG GTGAGCGCCT CCATGCGCAC GAGCGTGAAG TCGGCCTTCG ACCCCAAGGC CGCCGAGTTG AACTTCTTCT TCTCGCACGC CACGGAAACG GCCGATGAGC GGGGGATGGC CGATGTTGCT TGA
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Protein sequence | MNIKRFTAPT AREALAKARM AFGEGTLILS NRPTAGGVEV VATAEDALSS LHGGAEPAPN RLQERADDLA ASQPVRMSQT QPHAAPVPQP ARQPAPAARS TVAHDTEQLA MSTLSFQDYV RERMLRRRHE ALHGTSAPAP LNERAALERG LPEQRFEPRA ERLPEPPAPQ PVNAPVARHN PLRPMHAALG AEQLTPRRAE APATAAPTLA AGLGQQNLMK ELQSMKELIE DRFNTLAWLG QARQNPIQST LMLKLIRAGY SPALSRAVLE HLPEHLGAQD AVRWLMEVLE RNLRTDAQTL PLYEEGGIFA MVGATGVGKT TTTAKLAALC ARIHGPASVG LITLDTYRVG AHEQLRSYGR MLGVVAHLAH DRAALQDLLG LLSSKKMVLI DTTGVAPRDP RKRDLLDVLA LPGVKRLLVL NASSHGDTLD DVLTGFKTTG SQQAILSKVD EAVKLGPAID ALIRHQMVLR GVTNGQRVPE DWEAADARKL VSASMRTSVK SAFDPKAAEL NFFFSHATET ADERGMADVA
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