Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3795 |
Symbol | |
ID | 4671015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 4031886 |
End bp | 4032656 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639840828 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_987978 |
Protein GI | 121596082 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCACGT TCACCGAGGC GCAGATCATG GCCTGGCTGT CGCCGGTGCT GTGGCCGTTC CTGCGCGTGC TGGCGCTGTT CACGTCGGCG CCGGTGTTCT CGATGCGCGT GATCCCGGTG CGCACGCGCA TCGGGCTGGC CTTTTTGGTG GCGGTGTGCG CGCAGGCAGT GCTGCCCGAG CAGCCGGTCA TCAGCCTGAA CAGCCGCGAG GCCGCGGGCG CGGTGGTGCA GCAGGTGGGG ATTGGCCTGG CGATGGGCTT CGCGGTGCGG CTGGTGTTCG CGGCCGTGGA GCTGGCCGGC GAAATCATCG GCCTGCAGAT GGGCCTGAAC TTCGCTTCAT TCTTCGACCC CGCGAGCAAT GCGCAGGTGA GCGCGGTGGC GCGCTTCTTC GGCAACATCT CCATGCTGCT GTTCGTGGTG ATCAACGGCC ACCTGATGGT GTTGATGGCC GTGGTCAAGA GTTTCGACAG CTTCCCCGTG GGCGGCAACT TTCTGCAGGC CATCGGGCAG ATGCGGCTGC ACGAGCTGGG TGCGTCGCTG TTCTCCAGCG CCTTGTGGAT CGCGCTGCCC ATGATTGCGC TGCTGCTGTT TGTGAACCTG ACCCTGGGCA TCATCTCGCG CGTGGCGCCG CAGATGAACA TCTATGCCGT GGGCTTCCCG GTCACGCTCA CCGTGGGCAT GCTGGGCATC ACGGCCACGC TGCCGATGCT GGAGCAACCC ATGCTGGCGC TGCTGCAGCA GTCCATCGAC CTGTTCGCCG CGCCGCGTTA G
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Protein sequence | MITFTEAQIM AWLSPVLWPF LRVLALFTSA PVFSMRVIPV RTRIGLAFLV AVCAQAVLPE QPVISLNSRE AAGAVVQQVG IGLAMGFAVR LVFAAVELAG EIIGLQMGLN FASFFDPASN AQVSAVARFF GNISMLLFVV INGHLMVLMA VVKSFDSFPV GGNFLQAIGQ MRLHELGASL FSSALWIALP MIALLLFVNL TLGIISRVAP QMNIYAVGFP VTLTVGMLGI TATLPMLEQP MLALLQQSID LFAAPR
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