Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3787 |
Symbol | |
ID | 4671519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 4024588 |
End bp | 4025325 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639840820 |
Product | chemoreceptor glutamine deamidase CheD |
Protein accession | YP_987970 |
Protein GI | 121596074 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.54993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCC CACCCGGAGC TGATCCACGG CCCTCTGCCT TGCCGGGCGG GGGGCTGGAG CGCCGGCGCA CGCCCCGCAT CACGCCTCTG CCTGCGAATG CCTCCGCAGG CACCGCGCCT GCCATGTCGC TCCAGGAGCT CAAGGCCTGT CCGCGCAGGC CGGGTGAGGC ATCGTTTTTC TTTTTCGATC ACCATTTCCA GCACAACGCG GTGAAGGTCT TGCCAGGCGA GTTTTTTGTC TCGCACGACA GCCTGGCCAT CATGACGGTG CTGGGATCGT GCATTGCCGC CTGTCTGTGG GACAGCCGCA TGCGCGTGGG AGGCATGAAC CACTTCATGC TGCCCGAGGG GGACAGCGCC GATGCGTCGG GCCGGTATGG TTCCTACGCC ATGGAACTGC TCATCAATGA GATGATGAAG CTGGGCGCTC GCCGCGAGAC GCTGCAGGCC AAGATCTTCG GCGGTGCCCA GGTGATGCAC AACTTCACCA CGCTCAACGT GGGCGAGCGC AACACCCGCT TTGTGCAAGA CTATCTGGCT ACGGAGCGCA TTCCGGTGGT GTCGGAGGAC GTGCTCGACA TCTATCCGCG CAAAGTGGTG TTCTTTCCGG TGACGGGCAA GGTGATGGTC AAGCGCCTGG CGCATGCCCA TCCCGAAACG CTGGAGCAGG AAGTGGTGCG CGGCAACGCA GCTACCGTGG CGCGCGCCAC CAGCGGAGGC TCCGTGGATC TGTTCTGA
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Protein sequence | MSIPPGADPR PSALPGGGLE RRRTPRITPL PANASAGTAP AMSLQELKAC PRRPGEASFF FFDHHFQHNA VKVLPGEFFV SHDSLAIMTV LGSCIAACLW DSRMRVGGMN HFMLPEGDSA DASGRYGSYA MELLINEMMK LGARRETLQA KIFGGAQVMH NFTTLNVGER NTRFVQDYLA TERIPVVSED VLDIYPRKVV FFPVTGKVMV KRLAHAHPET LEQEVVRGNA ATVARATSGG SVDLF
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