Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3747 |
Symbol | |
ID | 4672244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3969559 |
End bp | 3975384 |
Gene Length | 5826 bp |
Protein Length | 1941 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639840777 |
Product | UvrA family protein |
Protein accession | YP_987932 |
Protein GI | 121596036 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGG GACTGATCCG TATCCACGGC GCGCGCCAGC ACAACCTCAA GAACATCGAC CTGGACATCC GCACGGGCGA GCTCACCGTG GTCACCGGTC CCAGCGGCTC CGGCAAGTCC AGCCTGGTGT TCGACACGCT GTATGCCGAG GGCCAGCGCC GCTATGTGGA GACCTTCAGC GCCTACGCGC GCCAGTTCCT GGACCGCATG GACAAGCCCG CCGTGGACAA GGTGGAGGGC GTGCCCCCGG CCATCGCCAT CGACCAGACC AACCCCGTGC GCTCGTCGCG CTCCACCGTG GGCACGATGA CCGAGCTGAA CGACCACCTC AAGCTGCTGT TCGCGCGCGC TGGCCAACTC TTCGACCGCG AGACGGCGCT GCCCGTGCGC CACGATTCGC CGGACACCAT CCATGCCGAG TTGCAGCGGC GCTGCGCGGC GGAGGACGAC CCGCGCATCG TGCTCACTTT TCCCGTGGAA CTGCCCGCGG GCACCACCGC GGAGCAGTTG GAGCAATGGC TGTCGGCCAG CGGCTTCACC AAGGTGCAGG CCGAGCGCGA GGTGGCCACG CCCACAGGCC CGCGCAAGCT GCTGGACGTG GTGGCCGACC GCTTTCGTAT GGGCAACGTG GAGCGCGCGC GCGCGGTCGA GGCGATCGAG GTCGCGCTCA AGCGCGGCGG GGGGCGGCTC AATGTCTATC GCCTGCGGGA CGATGGCGAA GCAGACCTGT GGCGCTTCTC CACCGGCCTG CATTGCCCCG AGAGCGACCT GCGCTACGCC GAGCCCATCG CGTCCATGTT CTCGTTCAAC TCCGCCGTGG GCGCCTGCGA CACCTGCCGG GGCTTCGGCC GCGTGATCGG CGTGGACTAC GGCCTGGTCA TTCCCAACGA CAAGCTCACG CTGCGCGCCG GTGCGATCAA GACCATCCAG ACCCCCGCCT GGAAAGAAGC GCAGGACGAC CTCATGCGCC ATGCCGAGGC CGCCGGTATC CCGCGCGACA CGCCCTGGTA CAAGCTCACC GCGGAGCAAA AGCACTGGGT GATCGAAGGC ACGCCCGGCT TCAAGAACGG CAACTGGAAC AAGCAGTGGT ACGGCATCCG CCGCTTCTTC GAGTACCTGG AGAGCAAGGC CTACAAGATG CATATCCGCG TGCTGCTGTC CAAGTACCGC AGCTTCACGC CATGCCCGGT GTGCGCCGGC GCGCGCCTGA AGACCGAGAG CCTGCTGTGG CGGCTGGGCA GCAAGGAGGA CGCCGATGCC GTGCTCGACC CCGCGCAGCG CTTCCTGCCG CAGGGCGTGG CCTGGACGCG CGCGCAGCTG GAGGCGCTGC CCGGCCTGTG CCTGCACGAC CTGATGTTGC TGCCCATCGA CCGCCTGCGG CGCTTCTTCG CGCGCATGGC GGGTGTGCAG AATGCTCCTG TTTCAATAGC TGGTGGCGCT CTCCAGGTAA GCGCTACAGG CCAAAACGAC TCTCAGGCTG GCGATCGCCA GGCGCTGCAA CTGCTGCATG ACGAGATCGC CACGCGCCTC AAGTACCTGT GCGACGTGGG CATCGGCTAC CTCACGCTGG ACCGGCAAAG CCGCACGCTG TCGGGTGGCG AGGTGCAGCG CATCAACCTG ACCACGGCGT TGGGCACCTC GCTGGTGAAC ACGCTGTTCG TGCTGGACGA GCCCAGCATC GGCCTGCACC CGCGCGACAT GCACCGCATC ACCGAGGCCA TGCTGCGCCT GCGCGACGCG GGCAACACGC TGGTGGTGGT GGAGCACGAC CCCGCCGTGA TGCTCGCGGC CGACCGTGTC CTCGACTTCG GCCCGGGTCC CGGCGAGCGC GGCGGGCAGA TCGTGTTCGA CGGCACGGTG GGCGAACTGC GCCGCGCGCC CACGCTGACC GGCCAGTACC TCGGCGGGCA CAAACAGATC GGCACCGGGC TCAAGCGCCT GGTGACGGAT GCCACGCCGC GCCTGGTGCT GGAGGGTGCG CGCGAGCACA ACCTGCGCGA TGTGAACGTG GAGTTCCCGC TGCAGCGCCT GGTCACCATC ACCGGCGTGT CGGGCTCGGG CAAGTCCACG CTGATCCAGG ACGTGCTGGC GCCCGCGCTC ATGCGCCACT TCGGCAAGGC CACGGAGACG CCCGGCGCGC ATGAGCGCCT GCTGGGCGCC GACCACCTGA GCGACGTGGT GTTCGTGGAC CAGTCGCCCA TTGGCAAGAC GGCGCGCTCC AACCCCGTGA GCTATGTGGG TGCGTGGGAT GCCATCCGCG AGCTGTTCGC CGTGGCGCCG CTGGCCCGGG AGCGCGGCTA CACCGCGGCC AAGTTCAGCT TCAATTCGGG CGACGGGCGC TGCCCGACCT GCGGCGGCTC GGGTTTCGAG CATGTGGAGA TGCAGTTCCT GTCGGATGTG TACCTGCGCT GCCCCGACTG CGACGGCAAG CGCTACCGGC CCGAGATCCT GGAGGTGCGC ATCGAACGCG GTGGCAGGCT GCTCAACGTG GCGGACGCGC TGGACCTCAC CGTGCACGAG GCAGCAGAGC TGTTTGCGAA AGACCGCGAG GTGATCCGCG CGCTGCAGCC CATCGTGGAC GTGGGGCTGG AGTACGTGAA GCTGGGCCAG CCCGTGCCCA CGCTGAGCGG TGGCGAGGCG CAGCGCCTGA AGCTGGCGGG CTTCCTGGCC GAGGCGGCCC GGAGCCAGGC CAAGTCGCGC CAGCCGCTGG CCCGCAAGGG CACGCTGTTC CTGTTCGACG AGCCCACCAC CGGCCTGCAC TTCGACGACA TCGCCAAGCT CATGCGCGCG CTGCGCAAGC TGCTGGACGC GGGGCACTCG CTCATCGTCA TCGAGCACAA CCTGGACGTG ATCCGCGCCA GCGACTGGCT CATCGACCTG GGGCCCGAAG GCGGCGACGC CGGCGGCCAG GTGGTGGCCG AGGGCGCACC CGAGGAGGTG CGCCAGCACC CCACGTCGCA CACCGCGCAA GCGCTGCGCG AGTACGAACT GGCGCTGGGC GAGGGCGGCC ATTCGGTGCA CGAGCAGCAG GCGGTGCTAC GAAAAGAGAA GCTACTCGCG CTGGATGGAA AAGCGCCAGA GGCCAAAAAC GCCATAGAGA TCGTGAACGC GCGTGAGCAC AACCTGCGGC ACCTCACGCT GGACATTCCG CGCGGCCGGT TCAACGTGAT CACCGGCGTG AGCGGCTCGG GCAAGTCCAC GCTGGCGTTC GACATCCTGT TCAACGAAGG CCAGCGCCGC TACCTGGAGA GCCTGAACGC CTACGCCCGC AGCATCGTGC AGCCGGCCGG GCGGCCCGAG GTGGACGCGG TGTACGGCAT ACCGCCCACC GTGGCCATCG AGCAGCGCCT GTCGCGCGGC GGGCGCAAGA GCACCGTGGG CACGACCACC GAGGTGTGGC ACTTCCTGCG TCTGCTGTAT GTGAAGCTGG GCGTGCAGCA CTGCGTGCAC GACGGCGCGG CGGTGCAGCC GCAGACCAGC GAGAGCATTG CCGCGCAGCT GCTGCGCGAC TACCGCGGCC AGCACATCGG CCTGCTGGCG CCGCTGGTCG TGAACCGCAA GGGCGTCTAT ACCGAACTGG CCGACTGGGC GCGCCCGCGT GGCTACACCC ACCTGCGCGT GGACGGCCAC TTCCTGCCGA CCGCGGGTTT TCCGCGCATC GACCGCTTCA AGGAGCACAC CATCGAGCTG CCCGTGGCCA GCGTGGACGT GTCGCCGGAG CATGAAGACA CGCTGCGCAC GCAACTGTCC AAGGCGCTGG AACTGGGCAA GGGCGTGGTG CATGTGCTGA GCGGCCTGGA CGGCCTGCAG CAGGCGCTGC AGGACGGAGC GCCCACGGCG CACATCGGGC GGCTGCAGGT GTTTTCCACC AAGCGCGCCT GCCCCGTGTG CGCCACCAGC TATGCCGAGC TTCAGCCTTC CCTGTTCTCC TACAACAGCA AGCATGGCTG GTGCCCCGAC TGCGTGGGCA CGGGCGTCAA GCTCACATCG GCGCAGCGCA AGGTGTTGGA CGACTCCGTG CAGTCGGAGG ACAACCGCGG CCGCGAGCAA ACCTTTGCCG AGCCCGAAGT GGAGGACGTG GCCGACGCCG CCTGTCCCAC CTGCCAGGGC ACGCGCCTGA ACCCGGTGGC GCGCGCCGTG CGGTTCGCCG GCACGCCGAT CACCGAGGTG GCGCGCCTGT CGGTGGCCGA AGTGCGGCAG TGGATCGCCG GGCTGCAGCT GTCGGGGCGC GAGGCGGAGA TTGCGCGCGA CCTGATCCCC GAGATCCAGA GCCGGCTGGA ATTCCTGGAG GAGGTCGGCC TGTCCTACCT CACGCTGGAC CGCGGCGCGC CCACGCTCAG CGGCGGCGAG GCGCAGCGCA TCCGCCTGGC GGCGCAGCTG GGCAGCAACC TGCAGGGCGT GTGCTACGTG CTGGACGAGC CGACCATCGG CCTGCACGCG CGCGACAACC AGATCCTGCT GAACGCCCTG CACAAGCTCG GCGACAAGGG CAACACCCTG GTGGTGGTGG AGCACGACGA GGACACCATC CGCCGCGCCG ACCACATCAT CGACATCGGC CCCAGCGCGG GCAAGCGCGG CGGGCGCCTG GTGGCCCAGG GCACGGTGGC CGACGTGCAG GCGGCTGCGG ACTCGCAGAC CGGCCGCTAC CTGCTGCACG CCATGCGCCA CCCGCTGCAG GCGCGTCGTC CGGTAGATGC TATTGAAAAA GTAGCTGATG GCGCCCATCC GGTGGGCTCT GGAGGCCAAA ACGATGCGGA ACCCCTGCGC TGGCTCACCG TGCACGGCGC GCACCTGCAC AACCTGCAGC AGGTCACTGC ACGCGTGCCG CTGCAGCGGC TGGTGGCCGT CACGGGCGTA AGCGGCTCGG GCAAGTCCAC GCTGGCGCGC GACGTGTTGC TGGCCAACGT GGCCGCCTGG GTGGGCCAGC GCGCCACCAA GGCCGGGCGC GACGCCATGG ATGCGGGCAA GGCGCCGCCG CTGGCCGGCT GCACCGGCCT GTCGGGCTTC GAGACCATCG ACCGCGTGCT GGAGGTGGAC CAGACGCCCA TCGGCAAGAC GCCGCGCAGC TGCCCCGCCA CCTACATCGG CTTTTGGGAC ACCATCCGCA AGCTGTTCGC CGAGACGCTG GAGGCCAAGG CGCGCGGCTA TGCGCCGGGG CGCTTCAGCT TCAACACCGG CGAGGGGCGC TGCCCGGCCT GCGAAGGGCA GGGCGTGCGC ACCATCGAGA TGAGCTTCCT GCCCGATGTG AAGGTGCCCT GCGAGGTCTG CCACGGCGCG CGCTTCAACC CCGAGACGCT GGCCGTCACC TGGCGCGGCA AAAGCATCGG CGACGTGCTG CAGATGGAAG TGGACGAGGC CGTGGAGTTC TTCGCCAGCA TGCCCGGCAT AGCCCACCCA CTGCAGCTCT TGAAGGACGT GGGCCTGGGC TACCTCACGC TGGGCCAGCC CAGCCCCACG CTGAGCGGCG GCGAGGCACA GCGCATCAAG CTGGTGACCG AGCTCACCAA GGTGCGCGAC GACGTAGGCC GACGCGGGCA GAAAAGCCCG CACACGCTCT ACGTGCTGGA TGAGCCCACC GTGGGCCTGC ACATGGCCGA CGTGCACAAG CTCATCCAGG TGCTGCACCG GCTGGTCAAC GGCGGCCACA GCGTGGTCGT GATCGAGCAC GATCTGGACG TGATTGCCGA GGCCGACTGG ATCATTGACC TGGGCCCCGA AGGCGGCAAG GACGGCGGGC GCATCGTGGC GGCAGCCACG CCGGAGGACG TGGTGCGCCA GGGCACGCAC ACCGGCAAGG CGCTGGCACC GGTGTTGGCG CGCTGA
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Protein sequence | MTQGLIRIHG ARQHNLKNID LDIRTGELTV VTGPSGSGKS SLVFDTLYAE GQRRYVETFS AYARQFLDRM DKPAVDKVEG VPPAIAIDQT NPVRSSRSTV GTMTELNDHL KLLFARAGQL FDRETALPVR HDSPDTIHAE LQRRCAAEDD PRIVLTFPVE LPAGTTAEQL EQWLSASGFT KVQAEREVAT PTGPRKLLDV VADRFRMGNV ERARAVEAIE VALKRGGGRL NVYRLRDDGE ADLWRFSTGL HCPESDLRYA EPIASMFSFN SAVGACDTCR GFGRVIGVDY GLVIPNDKLT LRAGAIKTIQ TPAWKEAQDD LMRHAEAAGI PRDTPWYKLT AEQKHWVIEG TPGFKNGNWN KQWYGIRRFF EYLESKAYKM HIRVLLSKYR SFTPCPVCAG ARLKTESLLW RLGSKEDADA VLDPAQRFLP QGVAWTRAQL EALPGLCLHD LMLLPIDRLR RFFARMAGVQ NAPVSIAGGA LQVSATGQND SQAGDRQALQ LLHDEIATRL KYLCDVGIGY LTLDRQSRTL SGGEVQRINL TTALGTSLVN TLFVLDEPSI GLHPRDMHRI TEAMLRLRDA GNTLVVVEHD PAVMLAADRV LDFGPGPGER GGQIVFDGTV GELRRAPTLT GQYLGGHKQI GTGLKRLVTD ATPRLVLEGA REHNLRDVNV EFPLQRLVTI TGVSGSGKST LIQDVLAPAL MRHFGKATET PGAHERLLGA DHLSDVVFVD QSPIGKTARS NPVSYVGAWD AIRELFAVAP LARERGYTAA KFSFNSGDGR CPTCGGSGFE HVEMQFLSDV YLRCPDCDGK RYRPEILEVR IERGGRLLNV ADALDLTVHE AAELFAKDRE VIRALQPIVD VGLEYVKLGQ PVPTLSGGEA QRLKLAGFLA EAARSQAKSR QPLARKGTLF LFDEPTTGLH FDDIAKLMRA LRKLLDAGHS LIVIEHNLDV IRASDWLIDL GPEGGDAGGQ VVAEGAPEEV RQHPTSHTAQ ALREYELALG EGGHSVHEQQ AVLRKEKLLA LDGKAPEAKN AIEIVNAREH NLRHLTLDIP RGRFNVITGV SGSGKSTLAF DILFNEGQRR YLESLNAYAR SIVQPAGRPE VDAVYGIPPT VAIEQRLSRG GRKSTVGTTT EVWHFLRLLY VKLGVQHCVH DGAAVQPQTS ESIAAQLLRD YRGQHIGLLA PLVVNRKGVY TELADWARPR GYTHLRVDGH FLPTAGFPRI DRFKEHTIEL PVASVDVSPE HEDTLRTQLS KALELGKGVV HVLSGLDGLQ QALQDGAPTA HIGRLQVFST KRACPVCATS YAELQPSLFS YNSKHGWCPD CVGTGVKLTS AQRKVLDDSV QSEDNRGREQ TFAEPEVEDV ADAACPTCQG TRLNPVARAV RFAGTPITEV ARLSVAEVRQ WIAGLQLSGR EAEIARDLIP EIQSRLEFLE EVGLSYLTLD RGAPTLSGGE AQRIRLAAQL GSNLQGVCYV LDEPTIGLHA RDNQILLNAL HKLGDKGNTL VVVEHDEDTI RRADHIIDIG PSAGKRGGRL VAQGTVADVQ AAADSQTGRY LLHAMRHPLQ ARRPVDAIEK VADGAHPVGS GGQNDAEPLR WLTVHGAHLH NLQQVTARVP LQRLVAVTGV SGSGKSTLAR DVLLANVAAW VGQRATKAGR DAMDAGKAPP LAGCTGLSGF ETIDRVLEVD QTPIGKTPRS CPATYIGFWD TIRKLFAETL EAKARGYAPG RFSFNTGEGR CPACEGQGVR TIEMSFLPDV KVPCEVCHGA RFNPETLAVT WRGKSIGDVL QMEVDEAVEF FASMPGIAHP LQLLKDVGLG YLTLGQPSPT LSGGEAQRIK LVTELTKVRD DVGRRGQKSP HTLYVLDEPT VGLHMADVHK LIQVLHRLVN GGHSVVVIEH DLDVIAEADW IIDLGPEGGK DGGRIVAAAT PEDVVRQGTH TGKALAPVLA R
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