Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3650 |
Symbol | |
ID | 4674341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3859132 |
End bp | 3860685 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639840682 |
Product | O-antigen polymerase |
Protein accession | YP_987837 |
Protein GI | 121595941 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.320613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCTG ATTTCACGCC GCTGGCGGTT TTGGCGATGG CGCTGCCCTT CGTCTTTGGC ATTACCGAGG CTCCGTATTC CAACTTTTGG CCGCTGCTGG CCAGCGGCGC CTGCGCCTGG CTGCTGGCGG CGCTGGCCTG GTGCGGCGCC TGGCGTCCCA GTGCCGCGCG CCTGGGCGCC CATCTGGCGG CGGGTCTGCT GCTCGCGGCG CTGGTGGCCG CGGCCATCGG CCTGGTGCAG TTCTTCATGG GCGACCCGGG GTGGGCGCCG TGGGTGCATG CCTCCAGCCC GGGCCTGGCC TTTGGCAACT TGCGCCAGCG CAACCAGCAG GCCACGTTGC TGGCGCTGGG CGTGTGGGCG CTGCTGTGGT GGGTGGCGCG CCTGCAGGAG CAGGTGGACG GCAACCCGGT GCTGGGAGGG CGCGGCGCGC GCTGGCCGGT GCTGGCGGCG GTCGCGGTGC CCTGGGCCAT GGTGCTGCTG GCCACTGCGG GCGCGGCCAC GGCTTCGCGC ACGGGGGCAC TGGAGTGGCT GGTGGTGTTG GCGCTGCTCG CCGTGTGGCG GCGCAGCAGT GGCGCACTGG CGCTCGGCAT GGCCGGCGTG GGGCTGGCGG TCTATGCGGT GGCCGCGTGG GGCTTGCCGC AGCTGTTGCT GCGGTGGACG GGCATGCGCA TGGACGGCCT GTTCATGCGG ATGGCCGATG GCTCCCAGAC CTGCGTCGGC CGCGCTACGC TGTGGTCCAA CGTGCTGGAG CTGATCGCCC AGCGGCCCTG GGCCGGCTGG GGCTGGGGCG AGCTGGACTA CGCGCACTAC ATCCACCCGT TTGCGGGAGA GCGTTTTTGC GTGCTGCTGG ACAACGCCCA CAACCTGCCG CTGCATCTGG CGGTGGAACT GGGCCTGCCG GCTGCGCTGC TGCTGTGCGG CGTGCCGCTG TGGGCCGCGC TGCGCGCGCG CCCCTGGCGC GAGACGCAGC CCCACCGCCA ACTGGCCTGG GGCGTGCTGG CCCTTGTGGG CGTGCACAGC CTGCTGGAGT TCCCGCTGTG GTACGGGCCG TTCCAACTGG CCACTGCGCT GGCCGTGCTG GTGCTGCTGG CACCCTGGCT GTCGCGTGCG GCGCGCTGGC GCCCCGTGGG TGCGGTGGTG GTGGGCGTGG CACTGCTGGC GGCCCCGGCC ATGGGGTTCG TACTGGTACG GGACTACGCG CGCGTGAGCG CGCTGTACCG TCCCACGGCC GAGCGGCCCG CGGCGCTGCG CGCGCTAACG GCTGCCGACG CGGCGCGGCA GGTGTGGTTC TTCCGTGCGC CAGCGCAGTT CGCGCAACTC ACCACTGCGG TGGTCACGCC CGCCAATGCG GCCGAGATGC ATGCCCTGGC GTTGCAACTG CTGCACTACT CGCCCGAGCC GCGCGTGATC GAGAAGCTCA TCGCCAGCGC GCGGCTGCTG GGCCGCGAGG ACGAGGTGGC GCTGCACACC GACCGCTACC GCCGCGCCTA TCCGTACGAA TTCGGGCGCT GGCAGCGCGG CCAGCCTTCC GGTGGCCCGC CGCTGGAACA CTGA
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Protein sequence | MRPDFTPLAV LAMALPFVFG ITEAPYSNFW PLLASGACAW LLAALAWCGA WRPSAARLGA HLAAGLLLAA LVAAAIGLVQ FFMGDPGWAP WVHASSPGLA FGNLRQRNQQ ATLLALGVWA LLWWVARLQE QVDGNPVLGG RGARWPVLAA VAVPWAMVLL ATAGAATASR TGALEWLVVL ALLAVWRRSS GALALGMAGV GLAVYAVAAW GLPQLLLRWT GMRMDGLFMR MADGSQTCVG RATLWSNVLE LIAQRPWAGW GWGELDYAHY IHPFAGERFC VLLDNAHNLP LHLAVELGLP AALLLCGVPL WAALRARPWR ETQPHRQLAW GVLALVGVHS LLEFPLWYGP FQLATALAVL VLLAPWLSRA ARWRPVGAVV VGVALLAAPA MGFVLVRDYA RVSALYRPTA ERPAALRALT AADAARQVWF FRAPAQFAQL TTAVVTPANA AEMHALALQL LHYSPEPRVI EKLIASARLL GREDEVALHT DRYRRAYPYE FGRWQRGQPS GGPPLEH
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