Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3625 |
Symbol | |
ID | 4674717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3829550 |
End bp | 3830896 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639840658 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_987813 |
Protein GI | 121595917 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0208192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGA AAGTTTTCAT CAAGACCTTC GGCTGCCAAA TGAACGAGTA CGACTCGGAC AAGATGGCCG ATGTGCTGGG CGCAGCCCAG GGCTATGAGC CCACCGACGA CCCGGAGCAA GCCGACCTGA TCCTGTTCAA CACCTGCTCG GTGCGCGAGA AAGCGCAGGA GAAGGTGTTC AGCGACCTCG GCCGCGTCAA GCACCTCAAG GACAAGGGCG TGCTCATCGG CGTGGGCGGC TGCGTGGCCA GCCAGGAGGG CGAGGAGATC ATCAAGCGCG CTCCGTTCGT GGACGTGGTC TTCGGCCCGC AGACGCTGCA CCGCCTGCCC GAGCTGCTCA ACGCCCGCGC CGCCAAGGCC AGGCCGCAGG TGGATATTTC CTTCCCTGAG ATCGAGAAGT TCGACCACCT GCCGCCCGCG CGCGTGGAGG GTGCCAGCGC CTTCGTGTCC ATCATGGAAG GCTGCTCCAA GTACTGCAGC TACTGTGTCG TGCCCTACAC GCGCGGCGAA GAGGTCAGCC GCCCGTTCGA GGACGTGCTG GTGGAAGTGG CCGGCCTGGC CGACCAGGGC GTGAAGGAAG TCACGCTGCT GGGCCAGAAC GTGAACGCCT ATCTGGGCGC CATGGGCGAC ACGGCGGAGA AAGCCGACTT TGCGCTGCTG CTGGAGTACG TGGCCGAGAT CCCCGGTATC GAGCGCATCC GCTTCACCAC CAGCCATCCC AACGAGTTCA CGCCGCGCCT GATCGAGGCC TACGCCAAGA TCCCGAAGCT GGTGAGCCAC CTGCACCTGC CCGTGCAGCA CGGCAGCGAC CGCATCCTGA TGGCCATGAA GCGTGGCTAC ACGGCCATGG AATACAAGAG CACCATACGC AAGCTGCGCG CCATCCGCCC CGACATGGCG ATGAGCAGCG ACTTCATCGT GGGCTTCCCG GGCGAGACCG AGGAAGACTT CCAGAAGATG ATGAAGCTGA TCGACGATGT GCGCTTCGAC AACTCCTTCA GCTTCATCTT CAGCCCGCGC CCCGGCACGC CCGCCGCCAA CCTGCACGAC GACACGCCGC ATGAGGTGAA ACTGCGCCGC CTGCAGGAGT TGCAGGCCGT GATCAACCGC AACATCCTGG AGATCAGCCA GGAGCGCGTG GGCACGGTGC AGCGTCTGCT GGTGGAGGGC GTATCCAAGC GCGACGGCAG CGAGCTGATG GGCCGCACCG AATGCAACCG CGTGGTCAAC TTCCCCGGCC ACGAGCGGCT GATCGGCCAG ATGATCGACG TGAAGATCAC CGAGGCGCGT ACCTACACGC TGCGCGGCGA GGTGGTGATG GGCGAGGTCA CGACCGCGGT CGGATGA
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Protein sequence | MSKKVFIKTF GCQMNEYDSD KMADVLGAAQ GYEPTDDPEQ ADLILFNTCS VREKAQEKVF SDLGRVKHLK DKGVLIGVGG CVASQEGEEI IKRAPFVDVV FGPQTLHRLP ELLNARAAKA RPQVDISFPE IEKFDHLPPA RVEGASAFVS IMEGCSKYCS YCVVPYTRGE EVSRPFEDVL VEVAGLADQG VKEVTLLGQN VNAYLGAMGD TAEKADFALL LEYVAEIPGI ERIRFTTSHP NEFTPRLIEA YAKIPKLVSH LHLPVQHGSD RILMAMKRGY TAMEYKSTIR KLRAIRPDMA MSSDFIVGFP GETEEDFQKM MKLIDDVRFD NSFSFIFSPR PGTPAANLHD DTPHEVKLRR LQELQAVINR NILEISQERV GTVQRLLVEG VSKRDGSELM GRTECNRVVN FPGHERLIGQ MIDVKITEAR TYTLRGEVVM GEVTTAVG
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