Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3578 |
Symbol | |
ID | 4672598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3775899 |
End bp | 3776291 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639840610 |
Product | response regulator receiver protein |
Protein accession | YP_987766 |
Protein GI | 121595870 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.677729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0425656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTACGA CGACGACCGG TCCCACCTTC CGTGTCCTGG TGGTGGACGA CAGCAATACC ATACGGCGCA GCGCCGAAAT TTTCCTCAAG CAGGGAGGGC ACGAGGTTTT ATTGGCCGAC GATGGTTTCG ATGCCTTGGC CAAAGTCAAT GATTACCAGC CTCAGCTGAT TTTCTGCGAC ATCCTCATGC CCAAGCTGGA TGGTTATCAG ACCTGCGCCA TCATCAAACG CAACGCGCAT TTTGCTGATA CGCCCGTGGT AATGCTTTCA TCCAAGGACG GGGTTTTCGA TAAGGCGCGC GGCCGCATGG TCGGTTGCCA GGAATATCTG ACCAAACCAT TTACCAAAGA CCAGTTGCTG CAGGCTGTGC AGCAATTTGG AAATGCCCAA TAA
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Protein sequence | MATTTTGPTF RVLVVDDSNT IRRSAEIFLK QGGHEVLLAD DGFDALAKVN DYQPQLIFCD ILMPKLDGYQ TCAIIKRNAH FADTPVVMLS SKDGVFDKAR GRMVGCQEYL TKPFTKDQLL QAVQQFGNAQ
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