Gene Ajs_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3578 
Symbol 
ID4672598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3775899 
End bp3776291 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content53% 
IMG OID639840610 
Productresponse regulator receiver protein 
Protein accessionYP_987766 
Protein GI121595870 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.677729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0425656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTACGA CGACGACCGG TCCCACCTTC CGTGTCCTGG TGGTGGACGA CAGCAATACC 
ATACGGCGCA GCGCCGAAAT TTTCCTCAAG CAGGGAGGGC ACGAGGTTTT ATTGGCCGAC
GATGGTTTCG ATGCCTTGGC CAAAGTCAAT GATTACCAGC CTCAGCTGAT TTTCTGCGAC
ATCCTCATGC CCAAGCTGGA TGGTTATCAG ACCTGCGCCA TCATCAAACG CAACGCGCAT
TTTGCTGATA CGCCCGTGGT AATGCTTTCA TCCAAGGACG GGGTTTTCGA TAAGGCGCGC
GGCCGCATGG TCGGTTGCCA GGAATATCTG ACCAAACCAT TTACCAAAGA CCAGTTGCTG
CAGGCTGTGC AGCAATTTGG AAATGCCCAA TAA
 
Protein sequence
MATTTTGPTF RVLVVDDSNT IRRSAEIFLK QGGHEVLLAD DGFDALAKVN DYQPQLIFCD 
ILMPKLDGYQ TCAIIKRNAH FADTPVVMLS SKDGVFDKAR GRMVGCQEYL TKPFTKDQLL
QAVQQFGNAQ