Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3566 |
Symbol | |
ID | 4672321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3759183 |
End bp | 3760259 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639840598 |
Product | ABC transporter related |
Protein accession | YP_987754 |
Protein GI | 121595858 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0434077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.522796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCTGG AAGTGTCTCA ATTGGACGTG CGGTACGCCA ACCGCCCGCA AGCCGCCGTG CGCGGCGTGA CCTTGGGCCT GGCCGCCGGC GAGATCGGTG TGCTCATCGG CCCCTCGGGC TGCGGCAAGA CCACCCTGCT GCGCGCGGTG GCGGGGCTGG AACCCGTCGC CGAAGGAGCC ATCCGCCTGG GGGGCGAGGT GGTGGGCGCA CCGGGGCGCA GCATGCCCCC CGAGCAGCGG CGCATGGGCA TGGTGTTCCA GGACTATGCG CTGTTTCCGC ACCTCAGCGT CGGGCGCAAC GTGGCTTTCG GCATCCACGC ACTCCCCCGG GCGGAGCAGG CCGAACGCGT GCGCGAGTCC CTGGCCCTGG TGGGTCTGGA GGGCAGCGAG GCGCGCTTTC CGCACGAGCT CTCGGGCGGC CAGCAGCAGC GCGTGGCATT GGCGCGCGCG CTGGCACCGC GCCCGCGGCT GATGCTGCTG GACGAGCCGT TTTCCAACCT GGATGTGGAC TTGCGCGAGC GGCTGGCCCA CGAGGTGCGC AGCATCCTCA AGACCGCCGG CGCCACGGCA CTGTTCGTCA CGCACGACCA GTTGGAGGCC TTCGCCATCG GCGACCGCAT CGGCGTGCTG GAGGGCGGCC ACCTGCACCA GTGGGACGAT GCCTACTCCC TCTACCACCG CCCCGCCACG CGCTTCGTGG CCGACTTCAT CGGCCATGGC GTGTTCGCCC CCGCCACGCT GGTGCAGCAG GGCAGCCATG TGGTGGCGCG CACCCCGCTG GGCGACCTGA CCGACATCGA CGGCTGCCTG CTGCCGGCAA GCTACCCCGG CGGCGAATGC GACGTGCTGC TGCGTGCCGA CGACGTGGTG CATGACGACA GCTCACCCGT GCGGGCGCGC ATCGTGCGCA AGGCCTTTCG CGGTTCGGAA TTTCTGTACA CGCTGGAACT GGCCAACGGC CTCACCGTGA TGGCCCACGT GCCCAGCCAC CATGACCATG CCATGGGCGA ATGGATCGGC ATTCGCACGC AGGTCGACCA CGTGGTGGCG TTCGCACGGG AGAGCGCCGC ACGCTGA
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Protein sequence | MFLEVSQLDV RYANRPQAAV RGVTLGLAAG EIGVLIGPSG CGKTTLLRAV AGLEPVAEGA IRLGGEVVGA PGRSMPPEQR RMGMVFQDYA LFPHLSVGRN VAFGIHALPR AEQAERVRES LALVGLEGSE ARFPHELSGG QQQRVALARA LAPRPRLMLL DEPFSNLDVD LRERLAHEVR SILKTAGATA LFVTHDQLEA FAIGDRIGVL EGGHLHQWDD AYSLYHRPAT RFVADFIGHG VFAPATLVQQ GSHVVARTPL GDLTDIDGCL LPASYPGGEC DVLLRADDVV HDDSSPVRAR IVRKAFRGSE FLYTLELANG LTVMAHVPSH HDHAMGEWIG IRTQVDHVVA FARESAAR
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