Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3548 |
Symbol | |
ID | 4671226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3738668 |
End bp | 3739879 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639840580 |
Product | beta-ketoadipyl CoA thiolase |
Protein accession | YP_987737 |
Protein GI | 121595841 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.608439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACG CCCGCCACGC CTTCATCTGC GACGCGATCC GCACCCCCTT CGGCCGCTAC GGCGGCGCCC TCTCCAGCGT GCGCACCGAC GACCTGGGCG CGTTGCCCAT CAAGGCGCTG ATGGAGCGCA ACCCCGGCGT GGACTGGGCC GCGGTGGATG ACGTGCTGTA TGGCAACGCC AACCAGGCCG GCGAGGACAA CCGCAACGTG GCGCGCATGT CCAGCCTGCT GGCCGGCCTG CCCATCGACG TGCCCGGCGC CACCATCAAC CGCCTGTGCG GCTCGGGCCT GGACGCCGTG GGCTCCGCCG CGCGCGCCAT CAAGTCGGGC GAGGCGCGCT TGATGATCGC CGGCGGCGTC GAGTCCATGA GCCGCGCGCC CTTCGTGATG CCCAAGGCGG AAAGCGCCTT CAGCCGCAGC AACGCGGTGT ACGACACCAC CATCGGCTGG CGCTTCATCA ACAAGCTGAT GAAGGCTCAA TACGGCGTGG ACTCCATGCC CGAGACGGCC GAGAACGTGG CCGACGATTT CAAGATCGAG CGCGAGGCCC AGGACCGCAT GGCACTGGCC AGCCAACAGA AGGCGGCCGC CGCGATGGCC GCCGGCTACC TGGCCAAGGA AATCGTCAAC GTCGTCATTC CCCAGAAGAA GGGCGACGCC GTCGTGGTCA GCCAGGACGA GCATCCGCGC GCCACCACGC TGGAGGCGCT GGCCAAGCTC AAGGGCGTGG TGCGCGAGGG CGGCACCGTC ACGGCCGGCA ACGCCAGCGG CGTGAACGAC GGCGCCTGCG CGCTGCTGCT GGCCGATGAG GCGGCCGCCC AGCAATACAA CCTGGTGCCC CGCGCCCGCG TGGTGGGCAT GGCCGTGGCC GGCGTGGCGC CGCGCATCAT GGGCTTTGGC CCCGCGCCTG CCGTGCGCAA GGTGCTGGCC CAGACCGGCC TGACGCTGGA CCAGATGGAC GTGATCGAGC TGAACGAAGC TTTCGCCGCA CAGGGCCTGG CCGTGCTGCG CGACCTGGGT GTTGCCGATG ACGACAAGCG CGTCAACCAG TGGGGCGGCG CCATCGCCCT GGGCCACCCG CTGGGGGCCT CGGGCGCGCG CCTGGCCACC ACCGCCGTGA ACCAGCTGCA CACGCTGGGC GGCCGCTACG CACTGTGCAC CATGTGCATC GGCGTGGGCC AGGGCATCGC CGTGGTGCTG GAGCGCGTGT AA
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Protein sequence | MSNARHAFIC DAIRTPFGRY GGALSSVRTD DLGALPIKAL MERNPGVDWA AVDDVLYGNA NQAGEDNRNV ARMSSLLAGL PIDVPGATIN RLCGSGLDAV GSAARAIKSG EARLMIAGGV ESMSRAPFVM PKAESAFSRS NAVYDTTIGW RFINKLMKAQ YGVDSMPETA ENVADDFKIE REAQDRMALA SQQKAAAAMA AGYLAKEIVN VVIPQKKGDA VVVSQDEHPR ATTLEALAKL KGVVREGGTV TAGNASGVND GACALLLADE AAAQQYNLVP RARVVGMAVA GVAPRIMGFG PAPAVRKVLA QTGLTLDQMD VIELNEAFAA QGLAVLRDLG VADDDKRVNQ WGGAIALGHP LGASGARLAT TAVNQLHTLG GRYALCTMCI GVGQGIAVVL ERV
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