Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3502 |
Symbol | |
ID | 4672006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3699227 |
End bp | 3699679 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639840534 |
Product | preprotein translocase subunit SecB |
Protein accession | YP_987691 |
Protein GI | 121595795 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1952] Preprotein translocase subunit SecB |
TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.444299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAG AAACCCCCGT GTTCCAGATT CAGCGCGTGT ACCTGAAGGA CCTGTCGCTG GAGCAGCCCA ATTCGCCCGC GATCCTGCTG GAGCAGGAGC AGCCCAGCGT GGACATCCAG TTGGGGGTCG AGGCCACACC CGTGGTCGAA GGCATCTTTG AAGTGGCCGT GACCGCCACC GTGCAGACCA AGATCAAGGA CAAGACTGTG TTCCTGGTGG AGGCCAAGCA GGCCGGCATC TTCGAGATCC GCAACGTGCC CGAGGACCAG ATGGGCGCCA TCATCGGCAT TGCCTGCCCC CAGATCATCT ACCCCTACCT GCGCGGCAAC GTGGCCGACA CCGTGACGCG TGCGGGCTTT CCGCCCGTGC ACCTGGCCGA GATCAACTTC CAGGCCATGT ACGAGCAGCA ACAGGCCGCA GCCGCCGAGG CTGCCACCAG CACGGCCCAG TAA
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Protein sequence | MAEETPVFQI QRVYLKDLSL EQPNSPAILL EQEQPSVDIQ LGVEATPVVE GIFEVAVTAT VQTKIKDKTV FLVEAKQAGI FEIRNVPEDQ MGAIIGIACP QIIYPYLRGN VADTVTRAGF PPVHLAEINF QAMYEQQQAA AAEAATSTAQ
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