Gene Ajs_3502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3502 
Symbol 
ID4672006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3699227 
End bp3699679 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content64% 
IMG OID639840534 
Productpreprotein translocase subunit SecB 
Protein accessionYP_987691 
Protein GI121595795 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.444299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAG AAACCCCCGT GTTCCAGATT CAGCGCGTGT ACCTGAAGGA CCTGTCGCTG 
GAGCAGCCCA ATTCGCCCGC GATCCTGCTG GAGCAGGAGC AGCCCAGCGT GGACATCCAG
TTGGGGGTCG AGGCCACACC CGTGGTCGAA GGCATCTTTG AAGTGGCCGT GACCGCCACC
GTGCAGACCA AGATCAAGGA CAAGACTGTG TTCCTGGTGG AGGCCAAGCA GGCCGGCATC
TTCGAGATCC GCAACGTGCC CGAGGACCAG ATGGGCGCCA TCATCGGCAT TGCCTGCCCC
CAGATCATCT ACCCCTACCT GCGCGGCAAC GTGGCCGACA CCGTGACGCG TGCGGGCTTT
CCGCCCGTGC ACCTGGCCGA GATCAACTTC CAGGCCATGT ACGAGCAGCA ACAGGCCGCA
GCCGCCGAGG CTGCCACCAG CACGGCCCAG TAA
 
Protein sequence
MAEETPVFQI QRVYLKDLSL EQPNSPAILL EQEQPSVDIQ LGVEATPVVE GIFEVAVTAT 
VQTKIKDKTV FLVEAKQAGI FEIRNVPEDQ MGAIIGIACP QIIYPYLRGN VADTVTRAGF
PPVHLAEINF QAMYEQQQAA AAEAATSTAQ