Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3442 |
Symbol | |
ID | 4674360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3636367 |
End bp | 3637131 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639840476 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_987633 |
Protein GI | 121595737 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCTGC AAAGTAAGTC CTTGTCCGCG CCTTGCAAAG GCTGCCAGGA TCGTCCGCCG CTCGATCTGG CTTTCAGCAT GGCTTTTCAG CCGATCGTGG ACGTCCGCAG CCAAGCAGTG TTCGCCTATG AAGCCCTGGT GCGTGGCCTG GATGGCAGTA GCGCCAGCCA GATCCTTAGC CAGGTGAACG ACGACAACCG CTATCAATTT GACCAGGCCT GCCGCGTCAA GGCTGTGAGC TTGGCCGCGC GCCTGGGCAT TGCCTGCCAC GTCAGTATCA ATTTTCTGCC GAATGCCGTA TACGAACCCG CCGCTTGTAT CCGTACGACT CTGGAGGCAG CGCAGCAGCA CCAGTTTCCG ACCAGTCGGC TGATTTTCGA AATCACCGAA AACGAGCGCG TGGTCGATAA AGAACACCTC AAGAGCATCG TGCAAGAGTA CCGGCGGCGT GGCTTCAAGA CAGCCATCGA CGATTTCGGT GCTGGTTATT CCGGCCTCAA CCTGCTGGCC GAGTTCCAGC CCGACATCAT CAAGCTGGAC ATGGAATTGG TGCGCCACAT TGACAGCAAT CCTGTGCGCC GAGCCATCGT GCAGGGCATT CTGGGGGTGT GCCAGGCACT GTCCATCGAT GTAATCGCAG AGGGCGTGGA GGACGAGGCC GAATATCGAA CGCTGCGAGC GCTGGGCGTT CACTATTTCC AGGGCTACTT GTTTGCCAAA CCTGCTTTCG AGCAACTACC CGAGGTTGAT TGGCGCGCGG ACTGA
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Protein sequence | MLLQSKSLSA PCKGCQDRPP LDLAFSMAFQ PIVDVRSQAV FAYEALVRGL DGSSASQILS QVNDDNRYQF DQACRVKAVS LAARLGIACH VSINFLPNAV YEPAACIRTT LEAAQQHQFP TSRLIFEITE NERVVDKEHL KSIVQEYRRR GFKTAIDDFG AGYSGLNLLA EFQPDIIKLD MELVRHIDSN PVRRAIVQGI LGVCQALSID VIAEGVEDEA EYRTLRALGV HYFQGYLFAK PAFEQLPEVD WRAD
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