Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3422 |
Symbol | |
ID | 4674579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3614696 |
End bp | 3615886 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639840457 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_987615 |
Protein GI | 121595719 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.236253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCTC ACCGTCTTCC CTTGATCATT GCGATGAGTG CCTCCCTGCT GGCGACCGCC TGTGGCGGCG GCGACGACCC CGCACCGCTG CCGACGCTGA GCGGCCAGGC TCCGCTCGTG GTGGGGCACC GCGGCGCCTC GGGCTACCGC CCGGACCACA CGCTGGAGAG CTATGCACTG GCCATCCAGA TGGGGGCGGA TTTCATCGAG CCCGATTTGG TAGCCACCAA GGACGGCCAC CTGGTGGCAC GCCACGAACC CAACATCACC AGCACCACCG ATGTGGCCAG CCGCCCCGAG TTCGCCAGCC GCAAGACCAA GCGCATGGTC GATGGCGTGG AAGAAGAAGG CTGGTTCGCC ACCGACTTCA CGCTGGCGGA ACTGAAGACC CTGCGCGCCA TCCAGCCGCT GGCCGAGCGC GACCAGTCCT ATAACGGCAA GTTCCAGATC CCCACGCTGC GCGAGGTGCT GGACCTGGCC AAGACCGAGG GCGGCAAGGT GGGCCGCGTG ATCGGCGTCT ATCCCGAGAC CAAGCACCCC ACCTACCATG AAGATGCGGG CCTCAAGCTC GAAGACCGCC TGCTGGCCAT CCTGGCCGAG TACGGCTACA CCAAGAAGGA TTCGCCGGTC ATCCTGCAGT CGTTCGAGAC GGCCAACCTC AAGTACCTGC GCACCAAGAC GCAGGTGCGC CTCATCCAGC TGGTGGATGG CAACGACTAC GACTTCAAGA CCGGCGCGGT CACCTTCGAG GCGCCATATG ACCGCCCCTA CGACTGGACA CGCGCGGGCC GCAAGGACCT GTTCGCTTCC ATGGTCACGC CGGCGGGCCT GGCAGAGATC GCCAAGTACG CCGACGGCGT GGGTCCCTGG AAGCCCTACA TCGTGCCGGT CAAGGGCACC TTTGGCGCCG ACGGCAAGAT GGTCGACGTG AACAAGGATG GCGCGGTCAA CTACGCCGAC GCTTCCAGCA GCACCCCCAC CAGCCTGGTG GCCGACGCAC ACAAGCTGGG CCTGATGGTC CACACCTGGA CCATGCGCAA CGAAAACCGC CGCCTGGCCT TCGACTACAA AGGCGACCCC CAGGCCGAGT ACCTGCAGTT CTACCGCCTG GGCGTGGATG GTGTGTTCTC CGACTTTGCC GACACCGCGG TGGCTGCGCG CAAGGCCTAT CTGACGGAAA CGGGCCGCTG A
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Protein sequence | MSSHRLPLII AMSASLLATA CGGGDDPAPL PTLSGQAPLV VGHRGASGYR PDHTLESYAL AIQMGADFIE PDLVATKDGH LVARHEPNIT STTDVASRPE FASRKTKRMV DGVEEEGWFA TDFTLAELKT LRAIQPLAER DQSYNGKFQI PTLREVLDLA KTEGGKVGRV IGVYPETKHP TYHEDAGLKL EDRLLAILAE YGYTKKDSPV ILQSFETANL KYLRTKTQVR LIQLVDGNDY DFKTGAVTFE APYDRPYDWT RAGRKDLFAS MVTPAGLAEI AKYADGVGPW KPYIVPVKGT FGADGKMVDV NKDGAVNYAD ASSSTPTSLV ADAHKLGLMV HTWTMRNENR RLAFDYKGDP QAEYLQFYRL GVDGVFSDFA DTAVAARKAY LTETGR
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