Gene Ajs_3422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3422 
Symbol 
ID4674579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3614696 
End bp3615886 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content66% 
IMG OID639840457 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_987615 
Protein GI121595719 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.236253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCTC ACCGTCTTCC CTTGATCATT GCGATGAGTG CCTCCCTGCT GGCGACCGCC 
TGTGGCGGCG GCGACGACCC CGCACCGCTG CCGACGCTGA GCGGCCAGGC TCCGCTCGTG
GTGGGGCACC GCGGCGCCTC GGGCTACCGC CCGGACCACA CGCTGGAGAG CTATGCACTG
GCCATCCAGA TGGGGGCGGA TTTCATCGAG CCCGATTTGG TAGCCACCAA GGACGGCCAC
CTGGTGGCAC GCCACGAACC CAACATCACC AGCACCACCG ATGTGGCCAG CCGCCCCGAG
TTCGCCAGCC GCAAGACCAA GCGCATGGTC GATGGCGTGG AAGAAGAAGG CTGGTTCGCC
ACCGACTTCA CGCTGGCGGA ACTGAAGACC CTGCGCGCCA TCCAGCCGCT GGCCGAGCGC
GACCAGTCCT ATAACGGCAA GTTCCAGATC CCCACGCTGC GCGAGGTGCT GGACCTGGCC
AAGACCGAGG GCGGCAAGGT GGGCCGCGTG ATCGGCGTCT ATCCCGAGAC CAAGCACCCC
ACCTACCATG AAGATGCGGG CCTCAAGCTC GAAGACCGCC TGCTGGCCAT CCTGGCCGAG
TACGGCTACA CCAAGAAGGA TTCGCCGGTC ATCCTGCAGT CGTTCGAGAC GGCCAACCTC
AAGTACCTGC GCACCAAGAC GCAGGTGCGC CTCATCCAGC TGGTGGATGG CAACGACTAC
GACTTCAAGA CCGGCGCGGT CACCTTCGAG GCGCCATATG ACCGCCCCTA CGACTGGACA
CGCGCGGGCC GCAAGGACCT GTTCGCTTCC ATGGTCACGC CGGCGGGCCT GGCAGAGATC
GCCAAGTACG CCGACGGCGT GGGTCCCTGG AAGCCCTACA TCGTGCCGGT CAAGGGCACC
TTTGGCGCCG ACGGCAAGAT GGTCGACGTG AACAAGGATG GCGCGGTCAA CTACGCCGAC
GCTTCCAGCA GCACCCCCAC CAGCCTGGTG GCCGACGCAC ACAAGCTGGG CCTGATGGTC
CACACCTGGA CCATGCGCAA CGAAAACCGC CGCCTGGCCT TCGACTACAA AGGCGACCCC
CAGGCCGAGT ACCTGCAGTT CTACCGCCTG GGCGTGGATG GTGTGTTCTC CGACTTTGCC
GACACCGCGG TGGCTGCGCG CAAGGCCTAT CTGACGGAAA CGGGCCGCTG A
 
Protein sequence
MSSHRLPLII AMSASLLATA CGGGDDPAPL PTLSGQAPLV VGHRGASGYR PDHTLESYAL 
AIQMGADFIE PDLVATKDGH LVARHEPNIT STTDVASRPE FASRKTKRMV DGVEEEGWFA
TDFTLAELKT LRAIQPLAER DQSYNGKFQI PTLREVLDLA KTEGGKVGRV IGVYPETKHP
TYHEDAGLKL EDRLLAILAE YGYTKKDSPV ILQSFETANL KYLRTKTQVR LIQLVDGNDY
DFKTGAVTFE APYDRPYDWT RAGRKDLFAS MVTPAGLAEI AKYADGVGPW KPYIVPVKGT
FGADGKMVDV NKDGAVNYAD ASSSTPTSLV ADAHKLGLMV HTWTMRNENR RLAFDYKGDP
QAEYLQFYRL GVDGVFSDFA DTAVAARKAY LTETGR