| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3416 |
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| Symbol | |
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| ID | 4674602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3610575 |
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| End bp | 3611420 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639840451 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_987609 |
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| Protein GI | 121595713 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00399053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGC GCATGGACGT CTGGATCGAC ACCCATTGCC ACCTGGATGA ATTTGCAGAT
CACGGCGGCG CAGCGCTCGC AGATGCCGAG CGTGCACGCG CCGCGCAGGC CGGCGTGGCC
CACTGCGTGC TGCCCGCGGT GGAACTCGGC AATCTGCAGG CCGTGCGGGA CCTGGCGCAC
CGCCACGGCG ACAGCTATGC GCTGGGCATC CATCCCCTGT TCACTCCCGT CGCCGGCGAC
GAAGACTTGC CCGCCCTGGC GCGCGCGCTG GAGCAGTACC AGGACGACCC GCGGCTGGTG
GCCGTCGGCG AAATCGGGTT GGACCTCTTC GTGCCCCATC TGGACAGGCG ACGCCAGCAG
CACTTCTACC GGGCGCAGCT GCAGTTGGCG CGCCGGTTCG ACCTGCCCGT GATCCTGCAT
GTGCGCCGCT CGGCGGACCA GTTGCTCAAG GCGCTGCGCG AGCTGCCGGT GCGCGGCGGC
ATCGCCCATG CCTTCAACGG CAGCCTGCAG CAGGCGCAGG CCTTCATCGA TCTGGGCTTC
AAGCTGGGCT TTGGCGGCGC GGTCACCTTC GACCGTGCGC TGCAGTTGCG CCGCCTGGCC
ACCGAACTGC CGCTGGACGC GCTGGTGGTG GAGACCGATG CGCCCGACAT TCCGCCGCAC
TGGCTCTACG TGACCGCGGC CGAGCGCGCC GCTGGCCGCC CGCCCGCACG CAACACGCCT
GCACAGCTAC CGCGCATCGG TGCGGTGGTG GCGCAGCTGC GCGGCATCTC CAGCACAGAA
CTGGCCCATG CCACGCGCGC CAACGCTTGC GCAGCGTTGC CACGGCTGGC TGAACTGTTG
GCATAG
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| Protein sequence | MIRRMDVWID THCHLDEFAD HGGAALADAE RARAAQAGVA HCVLPAVELG NLQAVRDLAH
RHGDSYALGI HPLFTPVAGD EDLPALARAL EQYQDDPRLV AVGEIGLDLF VPHLDRRRQQ
HFYRAQLQLA RRFDLPVILH VRRSADQLLK ALRELPVRGG IAHAFNGSLQ QAQAFIDLGF
KLGFGGAVTF DRALQLRRLA TELPLDALVV ETDAPDIPPH WLYVTAAERA AGRPPARNTP
AQLPRIGAVV AQLRGISSTE LAHATRANAC AALPRLAELL A
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