| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3397 |
|---|
| Symbol | |
|---|
| ID | 4674100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3585646 |
|---|
| End bp | 3586203 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639840435 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_987593 |
|---|
| Protein GI | 121595697 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1403] Restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGTCT TGAAGCTGTC GGCCCAGGGG CTGCCGCAAT CCTGGATAAC GCTGGAGCAG
GCGGTCACGC ACTACGCCGC GGGCGAGGTG CGCTGGGAGA TCGGCGCGCA GGTCGCGCTG
TTTCGCGGTG GCCATAACGC CATCACCGGC GAGCAGTCAC AGATCGCGGT CAGCAGCATC
ATCGGTACGC GTGGCGTGCC GAACATCAAC CCCTTCGACC TCTACCCCAG CCTCACCAAC
GCCAAGCTGT TCGCACGCGA CCGCAACGTG TGCGCCTACT GCGGAGGGCA TTTCCAGGAA
CAGGACCTGA CCCGCGAGCA CATCGTGCCG TTTGCCAGGA ACGGCGTGGA CCACTGGATG
AACGTGGTCA CCTCGTGCCG CCCCTGCAAC CACCGCAAGG GCCCGCGTAC GCCCGAGCAG
GCGCATATGC CGCTGCTGTA CACGCCTTAC GTACCCAGCC TGTGGGAAGA CTTCATCCTG
CGCAACCGGC GCATCCTGGC TGACCAGATG GAGTTCCTCA TGGCCCACGT GCCCAAGTCG
TCGCGGCTGT TGAGCTGA
|
|---|
| Protein sequence | MKVLKLSAQG LPQSWITLEQ AVTHYAAGEV RWEIGAQVAL FRGGHNAITG EQSQIAVSSI
IGTRGVPNIN PFDLYPSLTN AKLFARDRNV CAYCGGHFQE QDLTREHIVP FARNGVDHWM
NVVTSCRPCN HRKGPRTPEQ AHMPLLYTPY VPSLWEDFIL RNRRILADQM EFLMAHVPKS
SRLLS
|
|---|
| |