| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3317 |
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| Symbol | |
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| ID | 4670632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3511764 |
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| End bp | 3514532 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639840356 |
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| Product | DNA polymerase I |
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| Protein accession | YP_987515 |
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| Protein GI | 121595619 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.397865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.106648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCC CCAAGACCCT GGTGCTGGTG GATGGCTCCA GCTACCTGTA CCGCGCATTC
CATGCCATGC CCGACCTGCG CGCCGTGCCG GGCGATCCCG CCAGCGCCCC CACGGGGGCC
ATCCGCGGCA TGATCAACAT GCTGCAGGCG CTCAAGAAAG AGGTCCCTGC CGACTACGCC
GCCTGCGTTT TCGATGCCAG CGGCCCCACT TTTCGCGACG CGCTGTACCC CGAGTACAAG
CAGCACCGCG CGCCCATGCC CGATGACCTG CGTGCGCAGA TCGAGCCCAT CCACGAGGTG
GTGCGGCTGC TGGGCTGGCC GGTGCTGTGT ATCCCCGGCG TGGAGGCCGA CGACGTGATC
GGCACGCTGG CTGCTACCGC GGCCGGCCAG GGCATGCAGG TGGTGATCTC CAGCGGCGAC
AAGGACCTGA GCCAGCTGGT GAACGAAAAC ATCACCATCA TCGACACCAT GAACGGCAAG
AAGCGGGACG TAGCCGGCGT GACCGCCGAG TTCGGCGTGC CCCCGACGCT CATGGTGGAC
TACCAGGCCC TGGTGGGCGA TGCCGTGGAC AACGTGCCCG GCGTGCCCAA GGTCGGCCCC
AAGACCGCCG CCAAATGGCT CACGGAATAC GGTTCGCTGG ATGCGCTGCT GGCCAACGCG
GGCGCCATCA AGGGCGTGGC CGGCGAGAAC CTGCGCGGGG CGCTGGACTG GCTGCCCACC
GCGCGCATGC TGGTCACTAT CAAGACCGAC TGCGACCTGG CGGGCCACCT CGATGGTCTG
CCTGCTATCG ATGCGATAGC TGTTGGCGCT GAGCAGGCGG ACGCGTTGCG CGATTTTTAT
CAAAAGTATG GCTTCAAGAG CCTGGCACGA GCGCTGCCGT CCGCGGTGGT GCCGGATGCT
GGCGCCAGCG GAGACCTCTT CGCCACGCCC GACGCCAGCG CCGTCGCCGT GCAGGCGCAA
CAGCGCGAGG TGACCTACGA CACCATCCTC ACCTGGGAGC AGCTCGACGG CTGGCTCGCG
CGCCTGAAGG CCGCGCCGCT GGCGGCGCTG GACACCGAGA CCACGTCGCT GGACGAGTTG
CGGGCCGAGA TCGTGGGCGT GTCCTTCAGC GTTGAGCCCG GAGCCGCCGC TTACATCCCG
CTGGCGCACA ACGGCCCTGA CGCGCCGCCG CAGCTGCCGC TGGCCGAGGT GCTGGAGCGC
CTGCGCCCCT GGCTGGAAGA CCCGGCCTGC CCCAAGCTGG GCCAGCACGT GAAGTACGAC
CGGCATGTGT TCGCCAACCA CGGCATCCAG GTGCGCGGCT ATGCGCACGA CACCATGCTG
CAAAGCTACG TGCTGGAAGT GCACAAGCCC CATGGCCTGG CCAGCCTGGC CGAGCGCCAC
ACGGGCCGCA CCGGCATCAG CTACGAAGAC CTGTGCGGCA AGGGGGCCAA GCAGATCCCG
TTTGCACAGG TCCCGGTGGA CAAGGCTGCG GCCTACTCGT GCGAGGACTC CGACCAGACG
CTGGATGTGC ACCGCGTGCT ATGGCCCCAG CTGCAGGCCG ACGACAAGCT GCGCGGCATC
TACGAGCTGG AGATGGCCTG CAGCGAGACC TTATTTCGCA TCGAGCGCAA CGGCGTGCTG
ATCGACGCGG GCAAGCTGGC CGCCCAGAGC CACGCGCTGG GCCAGCGCAT CCTGCAGCTG
GAGCAGGAGG CGTACGCCAT CGCCGGCCAG CCCTTCAACC TGGGCTCGCC CAAGCAATTG
GGTGAAATCT TCTTCGACAA GCTGGGCATG CCCGTGGTGA AGAAGACCGC CACCGGCGCG
CGCAGCACCG ACGAAGAGGT GCTGGAGAAG CTGGCCGAGG ACTACCCGCT GCCCGCCAAG
CTGCTGGAAC ACCGCAGCCT GTGCAAGCTC AAGGGCACCT ACACCGACAA ACTCAGCACG
CTGGCGGACC CGCGCACCGG CCGTGTCCAC ACCCACTATG CGCAGGCCGT GGCCGTCACC
GGGCGGCTGT CCAGCAACGA GCCCAACCTG CAGAACATCC CCATCCGCAC GCCGGAGGGC
CGGCGCGTGC GCGAGGCCTT CGTGGCACCC GCGGGCCGCG TGATTGCCAG TGCTGACTAC
AGCCAGATCG AGCTGCGCAT CATGGCGCAC ATCAGCGGCG ACGAGGCGCT GCTGCACGCC
TTCCGCGAGG GCCTGGACGT GCACCGCGCC ACGGCGGCCG AGGTGTTCGG CGTGGCGCTG
GACCAGGTGA GCAGCGAGCA GCGCCGCTAC GCCAAGGTCA TCAACTTCGG CCTGATCTAC
GGCATGAGCA GTTTCGGCCT GGCCAAGAAC CTGGGCATCG AGACCAAGGC CGCCGCCGCC
TATATCGACC GCTACTTCCA GCGCTACCCC GGCGTGAAGC AGTACATGGA AGAGACCAAG
GCCCGGGCCA AGGCGCGCGG CTACGTGGAG ACCGTGTTCG GCCGGCGCCT GTACCTGCCG
GAGATCAACT CGCCCAACGG CCCGCGCCGC GGCGCGGCCG AGCGCGCCGC CATCAACGCG
CCCATGCAGG GCACGGCGGC CGACCTCATC AAGAAGGCCA TGGTGGCCGT GCAGGGCGAG
CTGGACGCGC GCAAGCCCGA GGTGCTCATG ATCATGCAGG TGCACGACGA ACTGGTGTTC
GAGCTGCCCG AGGGCGAGGT GGACTGGCTG CGCCGTGAGA TCCCGCGCCT GATGGCCGGC
GTGGCCGCGC TGCAGGTACC GCTGCTGGCC GAAGTGGGCG TAGGGCCCGA CTGGGACAAG
GCGCACTGA
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| Protein sequence | MTRPKTLVLV DGSSYLYRAF HAMPDLRAVP GDPASAPTGA IRGMINMLQA LKKEVPADYA
ACVFDASGPT FRDALYPEYK QHRAPMPDDL RAQIEPIHEV VRLLGWPVLC IPGVEADDVI
GTLAATAAGQ GMQVVISSGD KDLSQLVNEN ITIIDTMNGK KRDVAGVTAE FGVPPTLMVD
YQALVGDAVD NVPGVPKVGP KTAAKWLTEY GSLDALLANA GAIKGVAGEN LRGALDWLPT
ARMLVTIKTD CDLAGHLDGL PAIDAIAVGA EQADALRDFY QKYGFKSLAR ALPSAVVPDA
GASGDLFATP DASAVAVQAQ QREVTYDTIL TWEQLDGWLA RLKAAPLAAL DTETTSLDEL
RAEIVGVSFS VEPGAAAYIP LAHNGPDAPP QLPLAEVLER LRPWLEDPAC PKLGQHVKYD
RHVFANHGIQ VRGYAHDTML QSYVLEVHKP HGLASLAERH TGRTGISYED LCGKGAKQIP
FAQVPVDKAA AYSCEDSDQT LDVHRVLWPQ LQADDKLRGI YELEMACSET LFRIERNGVL
IDAGKLAAQS HALGQRILQL EQEAYAIAGQ PFNLGSPKQL GEIFFDKLGM PVVKKTATGA
RSTDEEVLEK LAEDYPLPAK LLEHRSLCKL KGTYTDKLST LADPRTGRVH THYAQAVAVT
GRLSSNEPNL QNIPIRTPEG RRVREAFVAP AGRVIASADY SQIELRIMAH ISGDEALLHA
FREGLDVHRA TAAEVFGVAL DQVSSEQRRY AKVINFGLIY GMSSFGLAKN LGIETKAAAA
YIDRYFQRYP GVKQYMEETK ARAKARGYVE TVFGRRLYLP EINSPNGPRR GAAERAAINA
PMQGTAADLI KKAMVAVQGE LDARKPEVLM IMQVHDELVF ELPEGEVDWL RREIPRLMAG
VAALQVPLLA EVGVGPDWDK AH
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