| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3286 |
|---|
| Symbol | |
|---|
| ID | 4674532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3468932 |
|---|
| End bp | 3469975 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639840326 |
|---|
| Product | peptidase S49 |
|---|
| Protein accession | YP_987485 |
|---|
| Protein GI | 121595589 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC CCAACCGCAC CGAACCCACG GGATTCGAGG GAAATCCGCC CGCAGCGCCC
GACCTGTGGG CGCAACAAGC TACAAAAAAT GAAGCGAGCA AGGCCGCAGC CGCCCTCGGC
TGGGAGCGCG ATACGCTGGA GAAGCTGGTG CTCGGCACCC TGGCCGAGCA GCGCGCGGCG
CGCCGCTGGC GCAACTTCTG GCGCCTGGCG TGGGTCCTGT TGGCGGGCGC GGTGATCTGG
GCCGCGCTTT CGCGCGAAAT GACCGCCACC AGCAAGAGCA CGCCGCATAC GGCCGTAGTG
GACGTGAAGG GCGAGATCGC CGCGGGCGCC GAGGCCAGCG CCGAATTTGT CGTAGCCGCC
ATGCGCAGCG CATTCGAGGA TGCGGGTTCG CAGGCCGTGG TGCTGCTCAT CAACTCGCCG
GGCGGCAGTC CGGTGCAGGC GGGCATCATC AACGACGAGA TCGTGCGGCT GAAGGCCAAG
TACAACAAGC CCGTCTATGC CGTGGTCGAG GAAACCTGTG CCTCGGCGGC CTACTACATC
GCCGCGGCGG CGGACGGCAT CTTCGTGGAC AAGGCCAGCA TCGTGGGCAG CATCGGCGTG
CTGATGGACG GCTTCGGCTT CACCGGCGCC ATGGAAAAGC TGGGGGTGGA GCGCCGCCTG
CTCACCGCCG GTGAGAACAA GGGGTTTCTC GATCCGTTCA GCCCCCAGAC CGAAACCCAG
CGCGCATACG CCCAGGCCAT GCTCGACCAG ATCCACCAGC AGTTCATCGG CGTGGTGAAG
CAGGGGCGGG GCGACCGGCT CAAGGTCACG CCTGAAACCT TCAGCGGCCT GTTCTGGACG
GGCCAGCAGG CGGTGGAGAT GGGACTGGCC GACCAACTGG GCAACCTGGA CTACGTGGCG
CGCGAGGTGG TCAAGGCCGA AGACGTGATC GACTACACCC GCCGCGACAA CGTGGCCGAG
CGCCTGGCCA AGAAGTTTGG CGCCGCGGTA GGCATGGGTG CCGTGAAGGG CCTGGCCGCG
CTGCAGCTGC CGCAGCTGCG CTGA
|
|---|
| Protein sequence | MTDPNRTEPT GFEGNPPAAP DLWAQQATKN EASKAAAALG WERDTLEKLV LGTLAEQRAA
RRWRNFWRLA WVLLAGAVIW AALSREMTAT SKSTPHTAVV DVKGEIAAGA EASAEFVVAA
MRSAFEDAGS QAVVLLINSP GGSPVQAGII NDEIVRLKAK YNKPVYAVVE ETCASAAYYI
AAAADGIFVD KASIVGSIGV LMDGFGFTGA MEKLGVERRL LTAGENKGFL DPFSPQTETQ
RAYAQAMLDQ IHQQFIGVVK QGRGDRLKVT PETFSGLFWT GQQAVEMGLA DQLGNLDYVA
REVVKAEDVI DYTRRDNVAE RLAKKFGAAV GMGAVKGLAA LQLPQLR
|
|---|
| |