Gene Ajs_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3279 
Symbol 
ID4671491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3463392 
End bp3464360 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content66% 
IMG OID639840319 
Product[Acyl-carrier-protein] S-malonyltransferase 
Protein accessionYP_987478 
Protein GI121595582 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACTGTT TGACCATGTC GAAAACTTTT GCATTTGTGT TCCCCGGCCA AGGCTCGCAG 
TCGGTGGGCA TGCTGGACGC TTGGGGTGGC CATCCCGTGG TGGCCGAGAC GCTGCGCGAG
GCTTCCGAGG CGCTCGGCGA AGACGTCGGT GCGTTGATTC ATGCGGGGCC CAAGGAGGCG
CTGGCCCTTA CCACCAACAC CCAGCCGGTG ATGCTGGTGG CCGGGATTGC GGCTTGGCGC
GTGTGGTGCG CTGAGGGCGG GGCACTGCCG GCTGCCGTGG CCGGGCACTC CCTGGGCGAA
TACTCCGCGT TGGTGGCCTC GGGTGTTTTG AGTCTGGCCC AGGCAGCCCC GCTGGTGCGC
CTGCGTGCCG CTGCCATGCA GGAGGCCGTG CCCGTGGGGG TTGGCGCCAT GGCGGCCATC
CTCGGGCTGG AGTCAGCCAA GGTGATCGCC GGTTGCGCCG AGGCTACGGC CAGCTTTGGT
GCTGGATCCA CCGATGTGGT GGAAGCCGTG AATTTCAACG ATCCCGCTCA GACCGTGATT
GCGGGTACCA AGGCGGGCGT GGAGAAAGCC TGCGAAGTGC TCAAGGCAGC GGGCGCAAAG
CGCGCACTGC CGTTGCCGGT GTCGGCGCCC TTCCACTCCA GCCTGATGAA GCCCGCCGCA
GAAAAACTGC GTGCCGCGCT CGCTGCACTG GAATTGGGCG CTCCGCGCAT TCCCGTGGTC
AACAATGTGG ACGTCGCGGT GCAGCAAGAC GCAGATGCCA TCCGCGATGC ACTCTATCGG
CAGGCCTTCG GCCCGGTGCG CTGGGTGGAG TGTGTGCAGG CGCTGAAGGC GCGTGGCGTG
ACGCATGTGA TCGAATGCGG GCCCGGCAAG GTGCTGGCCG GGATGACCAA GCGCATCGAC
CCCGAACTGG TTGGCGCCTC ACTGTTTGAC CCGGCCACGC TGGCCGAAAC CAAGGAACTG
CTGGCATGA
 
Protein sequence
MNCLTMSKTF AFVFPGQGSQ SVGMLDAWGG HPVVAETLRE ASEALGEDVG ALIHAGPKEA 
LALTTNTQPV MLVAGIAAWR VWCAEGGALP AAVAGHSLGE YSALVASGVL SLAQAAPLVR
LRAAAMQEAV PVGVGAMAAI LGLESAKVIA GCAEATASFG AGSTDVVEAV NFNDPAQTVI
AGTKAGVEKA CEVLKAAGAK RALPLPVSAP FHSSLMKPAA EKLRAALAAL ELGAPRIPVV
NNVDVAVQQD ADAIRDALYR QAFGPVRWVE CVQALKARGV THVIECGPGK VLAGMTKRID
PELVGASLFD PATLAETKEL LA